| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689223
Identifier: 116689223
GI number: 116689223
Start: 1324088
End: 1326124
Strand: Reverse
Name: 116689223
Synonym: Bcen2424_1201
Alternate gene names: NA
Gene position: 1326124-1324088 (Counterclockwise)
Preceding gene: 116689224
Following gene: 116689221
Centisome position: 38.06
GC content: 66.62
Gene sequence:
>2037_bases ATGCCTTCGCGAAGCTTGCCGCTCGCCCGCTTCGCGAAGGCCATTCTTCCAACAACCGAAACTGGACTCCACATGCCCGC GTTGCCCAATGCTTCCCGTCGTCAGGCCCTGAAGATCCTCGCCGGCGCGCCGATGCTGCCCCTTTCCGGCCTCGCGCTGC CGGCCCTGCTGACGGGTTGCGGCGGCGACGACGATCCCGCGTCCACGCCGGCGCCGGTCGCCGCTGCCTATACGTCGGCG GCATTCTCGGCGATGACCGCGCCGACGCTCGACAACGCGGCCGCGATGGCCACGACGACGGTCGGCTCGACGCTGTCGGT GTCGTTCTCGGACGGCTCGTCGCGCAACTTCAAGCTCGCGTACAAGCCGTTCTTCGTGACGGGCGACATGGTGCCGGACG GCAACGGCGGCACGACGCTCGCGGGCGGCTACTACGACATCAACAACCAGCCGATCATCGATCGCTCGGTCGCCGGCAAG GAACGCCAGTTCTATTCCGACTGCCCGGACGGCAGCTCGCTGCTGACGCTGAAGAACGCGAACGTCCCCGGCGTGAAGGG CAACACGGTGTTCGCGGTCGTGCAGTTCGAATACACGACGCGCGACCAGGCGAGCGCGTCGCAGTACGGCCAGCTGCCGT CGCCGATCGCCGTGCTCACGCTCGACCAGGACCCGGCCACCGGCGCGCTGAAGGTCGTGAAGTACCACAACGTCGACACG TCGAAGGCGCACGGCCTGTGGATCACCTGCGGCGCGACCCTGTCGCCGTGGGGCACGCACCTGTCGAGCGAGGAATACGA GCCGGACGCGACGAAGGCCGCGACCGATGCGCAGTTCAAGGCGTTCAGCAAGAACACGTTCGGCGACGAGACGAAGGCGA ACCCCTACCACTACGGCCACCTGCCCGAGATCACCGTGAATCCGGACGGCACCGGCACCGTGAAGAAGCACTACTGCCTC GGCCGCATCTCGCACGAGCTGATCCAGGTCATGCCGGACCAGCGCACCGTGATGATGGGCGACGACGCCACCAACGGCGG CCTGTTCATGTTCGTCGCCGACAAGGCGGCCGACCTGTCGGCCGGCACGCTGTACGTCGCGAAGTGGACGCAGACGTCGT CCGCCGGCGCCGGCACCGCGACGCTGACGTGGATCAAGATCGGCCACGCGACCAGCAGCGAGATCGAGACGCTCGCGAAC ACGCTGAAGGCGTCGGACATCATGGACCTGGTGACGACCGATCCGAACGATGCGAGCTACACGAAGATCCACTTCGGCGG CAAGTTCAACTGGATGCGCGTGAAGCCGGGGATGGAGAAAGCGGCCGCGTTCCTCGAGACGCACCGCTACGCGGCGCTGC TCGGCGGCAGCATGGCGTTCACGAAGCTCGAAGGCACGACCGTGAACGCGAAGGACAAGATCGTCTACACGGCGATGTCG CGGATCGAAACGTCGATGGTCAAGGGCAACGCGGTGTCGCGCGACGTCGCGGTCGACAAGAAGATCGCCGCGGGCGCCGT CTACGCGCTGAACCTGAAGGCCGGCCAGCGCGACACGACGGGTGGCGCGATCGACAGCGAATGGGTGCCGGTCGACATGG GTGCGCCGGCCGCGCTGGTCGGCGAGGATCTCGCCGCGGCCGACGCGCTCGGCAACCTCGCGAACCCGGACAAGATCGCG AACCCGGACAACCTGAAGTTCTCCGAAAAGCTGCGCACCCTCTTCATCGGCGAAGACTCGGGCATGCACGTGAACAACTT CCTGTGGGCCTACAACGTCGACACGAAATCGCTCTCGCGCGTGCTGTCGTGCCCGGCCGGCGCCGAATCGACGGGCCTGC ACGCGGTCGACGAGATCAACGGCTGGACCTACATCATGAGCAACTTCCAGCATGCGGGCGACTGGGAATCGCCGCTGCAC GACAAGGTCAAGCCGACGCTCGACCCGCTCGTGCGCGCGAACTACAAGGATCGCTTCGGCGCCAGCGTCGGCTACCTGAC GGCCGAGCAGACCAGCATCAAGCTCGCGAAGGGCTGA
Upstream 100 bases:
>100_bases GGCGTCCGCCAGCTCACCTGACGGACGCCCGACGCCTCATTACGTTTTCGATTCAAAAAACTTTCATCTAGCGTCCTTAC ACTTCCGTCCAGTTTCCAAT
Downstream 100 bases:
>100_bases TTCCCACGCGAGGCGGAGGCGTTGCTCCCTTGACCGGGCGCCTCCGACCAGGCGTCGTTTCTTCATCACCGTTCATTCGT CGGCGCTCCACGCCGTTTCA
Product: phosphatase-like protein
Products: NA
Alternate protein names: Phosphatase; Exported Alkaline Phosphatase; Phosphatase-Like Protein; Cell Surface Protein; Phosphatase Or Zinc Metalloprotease With Signal Peptide; Twin-Arginine Translocation Pathway Signal; PKD Domain Protein; Lipoprotein
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MPSRSLPLARFAKAILPTTETGLHMPALPNASRRQALKILAGAPMLPLSGLALPALLTGCGGDDDPASTPAPVAAAYTSA AFSAMTAPTLDNAAAMATTTVGSTLSVSFSDGSSRNFKLAYKPFFVTGDMVPDGNGGTTLAGGYYDINNQPIIDRSVAGK ERQFYSDCPDGSSLLTLKNANVPGVKGNTVFAVVQFEYTTRDQASASQYGQLPSPIAVLTLDQDPATGALKVVKYHNVDT SKAHGLWITCGATLSPWGTHLSSEEYEPDATKAATDAQFKAFSKNTFGDETKANPYHYGHLPEITVNPDGTGTVKKHYCL GRISHELIQVMPDQRTVMMGDDATNGGLFMFVADKAADLSAGTLYVAKWTQTSSAGAGTATLTWIKIGHATSSEIETLAN TLKASDIMDLVTTDPNDASYTKIHFGGKFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMS RIETSMVKGNAVSRDVAVDKKIAAGAVYALNLKAGQRDTTGGAIDSEWVPVDMGAPAALVGEDLAAADALGNLANPDKIA NPDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKSLSRVLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLH DKVKPTLDPLVRANYKDRFGASVGYLTAEQTSIKLAKG
Sequences:
>Translated_678_residues MPSRSLPLARFAKAILPTTETGLHMPALPNASRRQALKILAGAPMLPLSGLALPALLTGCGGDDDPASTPAPVAAAYTSA AFSAMTAPTLDNAAAMATTTVGSTLSVSFSDGSSRNFKLAYKPFFVTGDMVPDGNGGTTLAGGYYDINNQPIIDRSVAGK ERQFYSDCPDGSSLLTLKNANVPGVKGNTVFAVVQFEYTTRDQASASQYGQLPSPIAVLTLDQDPATGALKVVKYHNVDT SKAHGLWITCGATLSPWGTHLSSEEYEPDATKAATDAQFKAFSKNTFGDETKANPYHYGHLPEITVNPDGTGTVKKHYCL GRISHELIQVMPDQRTVMMGDDATNGGLFMFVADKAADLSAGTLYVAKWTQTSSAGAGTATLTWIKIGHATSSEIETLAN TLKASDIMDLVTTDPNDASYTKIHFGGKFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMS RIETSMVKGNAVSRDVAVDKKIAAGAVYALNLKAGQRDTTGGAIDSEWVPVDMGAPAALVGEDLAAADALGNLANPDKIA NPDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKSLSRVLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLH DKVKPTLDPLVRANYKDRFGASVGYLTAEQTSIKLAKG >Mature_677_residues PSRSLPLARFAKAILPTTETGLHMPALPNASRRQALKILAGAPMLPLSGLALPALLTGCGGDDDPASTPAPVAAAYTSAA FSAMTAPTLDNAAAMATTTVGSTLSVSFSDGSSRNFKLAYKPFFVTGDMVPDGNGGTTLAGGYYDINNQPIIDRSVAGKE RQFYSDCPDGSSLLTLKNANVPGVKGNTVFAVVQFEYTTRDQASASQYGQLPSPIAVLTLDQDPATGALKVVKYHNVDTS KAHGLWITCGATLSPWGTHLSSEEYEPDATKAATDAQFKAFSKNTFGDETKANPYHYGHLPEITVNPDGTGTVKKHYCLG RISHELIQVMPDQRTVMMGDDATNGGLFMFVADKAADLSAGTLYVAKWTQTSSAGAGTATLTWIKIGHATSSEIETLANT LKASDIMDLVTTDPNDASYTKIHFGGKFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMSR IETSMVKGNAVSRDVAVDKKIAAGAVYALNLKAGQRDTTGGAIDSEWVPVDMGAPAALVGEDLAAADALGNLANPDKIAN PDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKSLSRVLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLHD KVKPTLDPLVRANYKDRFGASVGYLTAEQTSIKLAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71925; Mature: 71793
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRSLPLARFAKAILPTTETGLHMPALPNASRRQALKILAGAPMLPLSGLALPALLTGC CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC GGDDDPASTPAPVAAAYTSAAFSAMTAPTLDNAAAMATTTVGSTLSVSFSDGSSRNFKLA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEECCCCCCCEEEE YKPFFVTGDMVPDGNGGTTLAGGYYDINNQPIIDRSVAGKERQFYSDCPDGSSLLTLKNA EEEEEEECCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECC NVPGVKGNTVFAVVQFEYTTRDQASASQYGQLPSPIAVLTLDQDPATGALKVVKYHNVDT CCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCC SKAHGLWITCGATLSPWGTHLSSEEYEPDATKAATDAQFKAFSKNTFGDETKANPYHYGH CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHECCCCCCCCCCCCCCEECCC LPEITVNPDGTGTVKKHYCLGRISHELIQVMPDQRTVMMGDDATNGGLFMFVADKAADLS CCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCC AGTLYVAKWTQTSSAGAGTATLTWIKIGHATSSEIETLANTLKASDIMDLVTTDPNDASY CCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCE TKIHFGGKFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMS EEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCEEEHHHH RIETSMVKGNAVSRDVAVDKKIAAGAVYALNLKAGQRDTTGGAIDSEWVPVDMGAPAALV HHHHHHHCCCCCCCCHHHCCHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHH GEDLAAADALGNLANPDKIANPDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKSLSR CCHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCCEEEEEEEEEECCHHHHHH VLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLHDKVKPTLDPLVRANYKDRFG HHCCCCCCCCCCCEEHHHCCCEEEEECCCCCCCCCCCCCHHCCCCCHHHHHHCCCCHHCC ASVGYLTAEQTSIKLAKG CCEEEEEECCCEEEEECC >Mature Secondary Structure PSRSLPLARFAKAILPTTETGLHMPALPNASRRQALKILAGAPMLPLSGLALPALLTGC CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC GGDDDPASTPAPVAAAYTSAAFSAMTAPTLDNAAAMATTTVGSTLSVSFSDGSSRNFKLA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEECCCCCCCEEEE YKPFFVTGDMVPDGNGGTTLAGGYYDINNQPIIDRSVAGKERQFYSDCPDGSSLLTLKNA EEEEEEECCCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECC NVPGVKGNTVFAVVQFEYTTRDQASASQYGQLPSPIAVLTLDQDPATGALKVVKYHNVDT CCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCEEEEEECCCCCCCEEEEEEEECCCC SKAHGLWITCGATLSPWGTHLSSEEYEPDATKAATDAQFKAFSKNTFGDETKANPYHYGH CCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHECCCCCCCCCCCCCCEECCC LPEITVNPDGTGTVKKHYCLGRISHELIQVMPDQRTVMMGDDATNGGLFMFVADKAADLS CCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCCC AGTLYVAKWTQTSSAGAGTATLTWIKIGHATSSEIETLANTLKASDIMDLVTTDPNDASY CCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCE TKIHFGGKFNWMRVKPGMEKAAAFLETHRYAALLGGSMAFTKLEGTTVNAKDKIVYTAMS EEEEECCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEECCCCCEEEHHHH RIETSMVKGNAVSRDVAVDKKIAAGAVYALNLKAGQRDTTGGAIDSEWVPVDMGAPAALV HHHHHHHCCCCCCCCHHHCCHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHH GEDLAAADALGNLANPDKIANPDNLKFSEKLRTLFIGEDSGMHVNNFLWAYNVDTKSLSR CCHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEEEECCCCCEEEEEEEEEECCHHHHHH VLSCPAGAESTGLHAVDEINGWTYIMSNFQHAGDWESPLHDKVKPTLDPLVRANYKDRFG HHCCCCCCCCCCCEEHHHCCCEEEEECCCCCCCCCCCCCHHCCCCCHHHHHHCCCCHHCC ASVGYLTAEQTSIKLAKG CCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA