Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689184

Identifier: 116689184

GI number: 116689184

Start: 1273854

End: 1274318

Strand: Direct

Name: 116689184

Synonym: Bcen2424_1162

Alternate gene names: NA

Gene position: 1273854-1274318 (Clockwise)

Preceding gene: 116689183

Following gene: 116689186

Centisome position: 36.56

GC content: 68.82

Gene sequence:

>465_bases
ATGATCGTCCGCTGGTTGCTGGCTGCCATTCACCTGAGTGCGTTCGGCGTCGCATTCGCCGCGATCGCGGCGCGTAACCG
TGCGTTGCGCCGGCTCATCGCGTCGGCGCAGCCAGCCGATTTGCCCGGCGTGTTCAAGGCGGATGCGGTCTGGGGGCTGT
CGGCGCTCGTGCTGATCGCGACGGGCCTTGCGCGGGCGTTCGGCGGTTTCGAGAAAGGGGCCGCGTACTACCTGCACGAA
CCGCTCTTTCACCTGAAGATGACCGCGCTCGTGCTGCTCCTGCTGCTCGAAATCGTGCCGATGCTGGGGCTGATCCGCTG
GCGTATCGCCGCGCGGCGGCAGCAACCGCCCGATCTCGGCCGGGCGCGCACCTATGTGCGGATCGGCCACTGGCAGGCGG
TGCTGGTGATCGTCATCGTGTTCGCCGCGTCGGGGATGGCGCGGGGGATCGGGCTGGCCGGGTAG

Upstream 100 bases:

>100_bases
GACCGAAGGCGACCGCGTCGCGGTGCTCGCGCTCGACGCGGCGCTCAAGCAGATCGTCTGACACGGCTCGCGCACCGGGC
GCGGGCGACAAGGCGGCGCG

Downstream 100 bases:

>100_bases
GTGCGGTCGGTTAGGGAGGCCCGGTTAGGGAGGCCCGCTTAGGAGCGCCCGGTCAGGATCGTCGCGCGGCGACCGGCCGG
CCGCGCACTCGCGAATCCCG

Product: membrane protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIVRWLLAAIHLSAFGVAFAAIAARNRALRRLIASAQPADLPGVFKADAVWGLSALVLIATGLARAFGGFEKGAAYYLHE
PLFHLKMTALVLLLLLEIVPMLGLIRWRIAARRQQPPDLGRARTYVRIGHWQAVLVIVIVFAASGMARGIGLAG

Sequences:

>Translated_154_residues
MIVRWLLAAIHLSAFGVAFAAIAARNRALRRLIASAQPADLPGVFKADAVWGLSALVLIATGLARAFGGFEKGAAYYLHE
PLFHLKMTALVLLLLLEIVPMLGLIRWRIAARRQQPPDLGRARTYVRIGHWQAVLVIVIVFAASGMARGIGLAG
>Mature_154_residues
MIVRWLLAAIHLSAFGVAFAAIAARNRALRRLIASAQPADLPGVFKADAVWGLSALVLIATGLARAFGGFEKGAAYYLHE
PLFHLKMTALVLLLLLEIVPMLGLIRWRIAARRQQPPDLGRARTYVRIGHWQAVLVIVIVFAASGMARGIGLAG

Specific function: Unknown

COG id: COG3556

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16644; Mature: 16644

Theoretical pI: Translated: 12.13; Mature: 12.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRWLLAAIHLSAFGVAFAAIAARNRALRRLIASAQPADLPGVFKADAVWGLSALVLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TGLARAFGGFEKGAAYYLHEPLFHLKMTALVLLLLLEIVPMLGLIRWRIAARRQQPPDLG
HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RARTYVRIGHWQAVLVIVIVFAASGMARGIGLAG
HHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MIVRWLLAAIHLSAFGVAFAAIAARNRALRRLIASAQPADLPGVFKADAVWGLSALVLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TGLARAFGGFEKGAAYYLHEPLFHLKMTALVLLLLLEIVPMLGLIRWRIAARRQQPPDLG
HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RARTYVRIGHWQAVLVIVIVFAASGMARGIGLAG
HHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA