| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689170
Identifier: 116689170
GI number: 116689170
Start: 1260506
End: 1260742
Strand: Direct
Name: 116689170
Synonym: Bcen2424_1148
Alternate gene names: NA
Gene position: 1260506-1260742 (Clockwise)
Preceding gene: 116689167
Following gene: 116689171
Centisome position: 36.18
GC content: 65.4
Gene sequence:
>237_bases ATGGGTATCATCAAGATTTCCGAGCACATGCATGAACGGCTGCGCTCGACGAGTACAGCGCTGAGCCGTTCGATCAACGC GCAGGCCGAACACTGGCTGCGCGTCGGGATGCTGGCGGAACTCAACCCGGCGCTGTCCTACGGCGACATCTGCAAGATGC TGATCGAGGCCGAGGCGCGGGGCGGCGACGTGGGGCCGGCGGAGACGGCCGCGCATAGCATCGAGCAGGTGGCGTGA
Upstream 100 bases:
>100_bases CCCGTGGCGATTCGGCGGGACGCGGGACGCGAACGGCTTGCCCGGTCGTCGTACGCGGCGTAATATACGAAACAGCTACG TTTCGTTTAATTGGGGATAT
Downstream 100 bases:
>100_bases TGGCGAAACGAGAAATCCCGATCCGCGGTGCTGCGGAAATCGCCAAGTCGCGCGAAGCCGCGAAGCTCGCGTCGCAGGTG CTCACAATGATCACCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MGIIKISEHMHERLRSTSTALSRSINAQAEHWLRVGMLAELNPALSYGDICKMLIEAEARGGDVGPAETAAHSIEQVA
Sequences:
>Translated_78_residues MGIIKISEHMHERLRSTSTALSRSINAQAEHWLRVGMLAELNPALSYGDICKMLIEAEARGGDVGPAETAAHSIEQVA >Mature_77_residues GIIKISEHMHERLRSTSTALSRSINAQAEHWLRVGMLAELNPALSYGDICKMLIEAEARGGDVGPAETAAHSIEQVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8442; Mature: 8311
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIIKISEHMHERLRSTSTALSRSINAQAEHWLRVGMLAELNPALSYGDICKMLIEAEAR CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GGDVGPAETAAHSIEQVA CCCCCCHHHHHHHHHHCC >Mature Secondary Structure GIIKISEHMHERLRSTSTALSRSINAQAEHWLRVGMLAELNPALSYGDICKMLIEAEAR CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC GGDVGPAETAAHSIEQVA CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA