| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ygaZ [C]
Identifier: 116689119
GI number: 116689119
Start: 1207947
End: 1208714
Strand: Reverse
Name: ygaZ [C]
Synonym: Bcen2424_1096
Alternate gene names: 116689119
Gene position: 1208714-1207947 (Counterclockwise)
Preceding gene: 116689120
Following gene: 116689118
Centisome position: 34.69
GC content: 70.18
Gene sequence:
>768_bases ATGGAGGAGCGCTTCTTGAACAAGACACCCGCATCACCCCCGCGCCGCCCGCTCAACGAATGGCTCGACGGCGCGCGCGA CACGATCCCGATGATGATCGGCGCCGCGCCGTTCGGCGTGATATTCGGCACGCTCGTCGGCGGCGGTCCGCTCGCCGCGT GGCACGGCGCACTGATGTCGCTCGCCGTGTTCGCGGGCTCCGCGCAATTCATCGCGCTCGGCCTGATCGCCGGCAGCGCC AGTTTCGTCGTCGTGCTCGCCACGACGCTGATCGTGAACCTGCGTCACCTGCTGTACAGCGCGACGCTCGCGCCCTATGT CGCCCACCTGCCGCTGCGCTGGCGCGCGACGCTCGGCGCGTTGATGACCGACGAGGTGTTCGCGGTCGCCTACGGCCACT ACCGGCACTACCCGCCCGGTACGATCGGCCCCCACTACTTTTTCGGCTCCGGGCTCGCGATGTACCTGAACTGGCAGGTC TGGACGCTCGCGGGCATCGGCTTCGGCGCGGCGTTCCCGGGCCTGCAGTCGCTCGGCCTCGATTTCGCGATGGCGGCGAC CTTCATCGCGATCGTCGTCCCGCAGCTCGGCACGCTGCGCTATTTCGCGGCGGCCGCCACGGCCGGCACGCTCGCGTACT TCTGGCAGAGCTGGCCGTACAAGCTCGGGCTGCTCGGCGCGGTCGCCGCCGGCGTCGCGATCGGCGTCGTGCTCACGCTG CGGCACGATCGCACGCGCGCCAACGCTCGTTCGGAGGCCGCATCGTGA
Upstream 100 bases:
>100_bases CGCCGCGCCCCGTGCCGGCCGGCACGTGAGCACCGGCCCCGCTCCGGCGGGCGCAAGAACATACAAGCCGGCTCGCCGCC GGCCCGCTATCCTCCCGCTC
Downstream 100 bases:
>100_bases GCTACGCGCTGTTGATCCTCGGGATGGCCGTCATCACGTATGCGATCCGCTCGACGCTGTTCCTGTTCGGCGAGCGGCTG ACGTTCCCGCCGCTCGTGCG
Product: AzlC family protein
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC Protein; AzlC-Like; AzlC-Like Protein; Branched-Chain Amino Acid Transporter; Amino Acid Permease; AzlC Family Branched-Chain Amino Acid Transporter; Branched Chain Amino Acid ABC Transporter; Azaleucine Resistance Protein AzlC; Branched-Chain Amino Acid Permease Protein; Branched-Chain Amino Acid Permease AzlC; Branched Chain Amino Acid Efflux Pump LivE; Branched-Chain Amino Acid Exporter LIV- E Family; LIV-E Family Branched Chain Amino Acid Exporter; Branched Chain Amino Acid Exporter Family Protein; Integral Membrane Protein; AzlC-Like Family Protein; Branched-Chain Amino Acid Transporter Protein; Azlc Family Protein; Branched-Chain Amino Acid Permease AzlC Family Protein; Transport Protein-Like Protein; Branched Chain Aminoacid Transporter; Branched Chain Amino Acid ABC Transporter Permease; Inner Membrane Protein
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHGALMSLAVFAGSAQFIALGLIAGSA SFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMYLNWQV WTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQSWPYKLGLLGAVAAGVAIGVVLTL RHDRTRANARSEAAS
Sequences:
>Translated_255_residues MEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHGALMSLAVFAGSAQFIALGLIAGSA SFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMYLNWQV WTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQSWPYKLGLLGAVAAGVAIGVVLTL RHDRTRANARSEAAS >Mature_255_residues MEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHGALMSLAVFAGSAQFIALGLIAGSA SFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMYLNWQV WTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQSWPYKLGLLGAVAAGVAIGVVLTL RHDRTRANARSEAAS
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27109; Mature: 27109
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHGALMS CCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH LAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGA HHHHCCCHHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMYLNWQVWTLAGIGFGAAFPGLQSLGL HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEEEEEEEECCCHHHHCCCHHHHCH DFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQSWPYKLGLLGAVAAGVAIGVVLTL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEE RHDRTRANARSEAAS ECCHHHHHCHHCCCC >Mature Secondary Structure MEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHGALMS CCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH LAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGA HHHHCCCHHHHHHEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMYLNWQVWTLAGIGFGAAFPGLQSLGL HHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEEEEEEEEECCCHHHHCCCHHHHCH DFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQSWPYKLGLLGAVAAGVAIGVVLTL HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEE RHDRTRANARSEAAS ECCHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA