| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689111
Identifier: 116689111
GI number: 116689111
Start: 1201511
End: 1201927
Strand: Reverse
Name: 116689111
Synonym: Bcen2424_1088
Alternate gene names: NA
Gene position: 1201927-1201511 (Counterclockwise)
Preceding gene: 116689113
Following gene: 116689110
Centisome position: 34.5
GC content: 69.54
Gene sequence:
>417_bases TTGCACTGCGGCAACGCGGCGCGGCCAGCCCCGCGTGGCGGGGCTCCGGCGGCCATGCCGGCTCGCGCCCGAACCGGCGC CGGTCAGCGGCGCACCGTGATGCCCTGGTCGATCGTCCCGTACATCTCGATACTGCCGCCGCGCTCGCCGGTCGCACCCG CGCCACCCTGCGCACAGGCCGCGCAGATGAACGCGGCCGCCAACATGCAGAAAATCGTCTTCATCGTTGCATCGCGTCAC ATGCGGCGGCCCGTTGCCGCCGCGTCCGGCCATTCTACGCGTGGCCCGCGACGGCCCACGGTCCGGCCGGCCACGGCGTC AAAACCGCTGCATCCGACATTTCATCCGGAAGCGAAACATCGAATGCGCGCACGAACTACACTGCCTCTCATCCCGCTCG ACGAGACACGACGATGA
Upstream 100 bases:
>100_bases AATACGGTTTCGGTGCGGTCGAGGGCGGCCGGCACGGGGGACGGTTGGGGCATTGTTGTGGCTCCAGGCGGCAGGGGCGC TGTGATCGGGCCATTATACG
Downstream 100 bases:
>100_bases CTGACCAAGACGACCACCATTTTCCGGGCCTGAGCCGCATCGGCGCACTGATCGCCGATCCGGGCCGCGCCGCGATGCTG TGGGTGCTGATGGACGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MHCGNAARPAPRGGAPAAMPARARTGAGQRRTVMPWSIVPYISILPPRSPVAPAPPCAQAAQMNAAANMQKIVFIVASRH MRRPVAAASGHSTRGPRRPTVRPATASKPLHPTFHPEAKHRMRARTTLPLIPLDETRR
Sequences:
>Translated_138_residues MHCGNAARPAPRGGAPAAMPARARTGAGQRRTVMPWSIVPYISILPPRSPVAPAPPCAQAAQMNAAANMQKIVFIVASRH MRRPVAAASGHSTRGPRRPTVRPATASKPLHPTFHPEAKHRMRARTTLPLIPLDETRR >Mature_138_residues MHCGNAARPAPRGGAPAAMPARARTGAGQRRTVMPWSIVPYISILPPRSPVAPAPPCAQAAQMNAAANMQKIVFIVASRH MRRPVAAASGHSTRGPRRPTVRPATASKPLHPTFHPEAKHRMRARTTLPLIPLDETRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14864; Mature: 14864
Theoretical pI: Translated: 12.74; Mature: 12.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHCGNAARPAPRGGAPAAMPARARTGAGQRRTVMPWSIVPYISILPPRSPVAPAPPCAQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCHHH AQMNAAANMQKIVFIVASRHMRRPVAAASGHSTRGPRRPTVRPATASKPLHPTFHPEAKH HHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RMRARTTLPLIPLDETRR HHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHCGNAARPAPRGGAPAAMPARARTGAGQRRTVMPWSIVPYISILPPRSPVAPAPPCAQA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCHHH AQMNAAANMQKIVFIVASRHMRRPVAAASGHSTRGPRRPTVRPATASKPLHPTFHPEAKH HHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH RMRARTTLPLIPLDETRR HHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA