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The map label for this gene is dadA [H]

Identifier: 116689087

GI number: 116689087

Start: 1178502

End: 1179788

Strand: Reverse

Name: dadA [H]

Synonym: Bcen2424_1064

Alternate gene names: 116689087

Gene position: 1179788-1178502 (Counterclockwise)

Preceding gene: 116689090

Following gene: 116689081

Centisome position: 33.86

GC content: 67.91

Gene sequence:

>1287_bases
ATGCGAGTCGTCATTCTGGGCAGCGGTGTAGTGGGCGTGGCAAGCGCGTATTACCTTGCGCGCGCCGGCCATGAAGTCAC
GGTGATCGACCGGGAAGCCGGCCCGGCGCTGGAGACGAGTTTCGCGAACGCAGGCCAGATCTCGCCCGGCTATGCGGCGC
CGTGGGCCGCGCCCGGCGTGCCGCTGAAGGCCGTCAAATGGATGTTCGAAAAGCACGCGCCGCTCGCGATCCGCCTCGAC
GGCACGCGCTTCCAGCTCCAGTGGATGGTTCAGATGCTGCGCAACTGCACGGCCGAGCGCTATGCAGTCAACAAGGGCCG
GATGGTCCGTCTCGCCGAATACAGCCGCGACTGCCTGCAGGCGCTGCGCGCCGATACCGGCATCCAGTACGAAGGCCGCA
CGGGCGGCACGCTGCAACTGTTCCGCACGCAGCAGCAGCTCGACGGCGCGGCGAAGGACATCGCCGTGCTGCAGGAAGCG
AACGTGCCGTTCGAACTGCTGTCGCCGGCTGAACTGAAGCATGCCGAACCGGCGCTCGCCGCCGTCTCGCACAAGCTGAC
GGGCGGCCTGCGCCTGCCGGGCGACGAAACGGGCGATTGCCAGCTGTTCACGACGCGCCTCGCCGCGCTCGCCGAATCGC
TCGGCGTCAAGTTCCGCTACAACACGCCGATCGATGCGCTCGCGATCGCGGGCGGCAAGATCGCCGGCGTGCAGTGCGGC
AGCGAGACGGTGCGCGCGGATGCGTACGTCGTCGCGCTCGGCTCGTACTCGACGAACTTCATCTCGAACCTGATGAAGAT
CCCCGTCTATCCGCTGAAGGGCTATTCGATCACCGCGCCGATCGTCGACGCAGCGGCCGCGCCCGTATCGACCGTGCTCG
ACGAGACCTACAAGATCGCGATCACGCGCTTCGACCAACGCATCCGCGTCGGCGGCATGGCGGAAATCGTCGGCTTCGAC
AAGACGCTGCGCGCGGCGCGCCGCGAGACGCTCGAAATGTGCGTAAACGACCTGTTCCCGGGCGGCGGCGACACGTCGAA
GGCCACGTTCTGGACGGGCCTGCGCCCGATGACGCCGGACGGCACGCCGATCGTCGGCCGCACGCCGGTGTCGAACCTGT
TCCTGAACACCGGCCACGGCACGCTCGGCTGGACGATGTCGTGCGGCTCCGGCCAACTGCTCGCCGACCTGATCTCCGGG
AAGAAGCCGGCGATCCAGGCCGACGACCTGTCGGTGCATCGTTACCTGAAGGACGCGCCCGGCCAGACGCGCCCGGCCTA
CGCGTAA

Upstream 100 bases:

>100_bases
ATTCGACAATACCATAGCGCAAAAAACTAGATCAGCTAGAGGTTACACGGAGCCGCAGGTGCGCCCGGCCTCGACCTGAT
TCCTTCGATCTGGAGCAGCT

Downstream 100 bases:

>100_bases
ATCGGAACGGCCCGCGGCGGTGCGGGCTCGTTGCATCAGCGAAAAAGGCGCCCTCGGGCGCTTTTTTCGTTTCGGCGACT
GCGCGTGCGAGCGCCCGCTC

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEA
NVPFELLSPAELKHAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKDAPGQTRPAYA

Sequences:

>Translated_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEA
NVPFELLSPAELKHAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKDAPGQTRPAYA
>Mature_428_residues
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGVPLKAVKWMFEKHAPLAIRLD
GTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEA
NVPFELLSPAELKHAEPALAAVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCG
SETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIAITRFDQRIRVGGMAEIVGFD
KTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPDGTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISG
KKPAIQADDLSVHRYLKDAPGQTRPAYA

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=415, Percent_Identity=73.0120481927711, Blast_Score=639, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45875; Mature: 45875

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCHHHEECCCCCEEEHHHHHHHHHH
ALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEANVPFELLSPAELKHAEPALA
HHHHCCCCEECCCCCCEEEEEECHHHHCCHHHHHHHHHHCCCCCEECCCHHHCCCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHEEECCCEEEEEECC
SETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIA
CCCEECCEEEEEECCCCHHHHHHHHHCCCEECCCCEEECCHHHHHHCHHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFDKTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISGKKPAIQADDLSVHRYLKDAP
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCEECCCHHHHHHHHCCC
GQTRPAYA
CCCCCCCC
>Mature Secondary Structure
MRVVILGSGVVGVASAYYLARAGHEVTVIDREAGPALETSFANAGQISPGYAAPWAAPGV
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PLKAVKWMFEKHAPLAIRLDGTRFQLQWMVQMLRNCTAERYAVNKGRMVRLAEYSRDCLQ
CHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHCCHHHEECCCCCEEEHHHHHHHHHH
ALRADTGIQYEGRTGGTLQLFRTQQQLDGAAKDIAVLQEANVPFELLSPAELKHAEPALA
HHHHCCCCEECCCCCCEEEEEECHHHHCCHHHHHHHHHHCCCCCEECCCHHHCCCCHHHH
AVSHKLTGGLRLPGDETGDCQLFTTRLAALAESLGVKFRYNTPIDALAIAGGKIAGVQCG
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHEEECCCEEEEEECC
SETVRADAYVVALGSYSTNFISNLMKIPVYPLKGYSITAPIVDAAAAPVSTVLDETYKIA
CCCEECCEEEEEECCCCHHHHHHHHHCCCEECCCCEEECCHHHHHHCHHHHHHCCHHEEE
ITRFDQRIRVGGMAEIVGFDKTLRAARRETLEMCVNDLFPGGGDTSKATFWTGLRPMTPD
EEECCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GTPIVGRTPVSNLFLNTGHGTLGWTMSCGSGQLLADLISGKKPAIQADDLSVHRYLKDAP
CCEEECCCCCCCEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCEECCCHHHHHHHHCCC
GQTRPAYA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA