| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is ubiG [H]
Identifier: 116689061
GI number: 116689061
Start: 1150409
End: 1151107
Strand: Reverse
Name: ubiG [H]
Synonym: Bcen2424_1038
Alternate gene names: 116689061
Gene position: 1151107-1150409 (Counterclockwise)
Preceding gene: 116689062
Following gene: 116689060
Centisome position: 33.04
GC content: 64.95
Gene sequence:
>699_bases ATGACCAACGCCGATCCGCACGAACTCCAGAAATTCAGCGACCTCGCCCACCGATGGTGGGATCCGAATGCCGAATTCAA ACCGCTGCACGACCTGAACCCGGTCCGGCTCGGCTGGATCGACGCGCATGCGCACCTGGCCGGCAAGCGCGCACTCGACA TCGGCTGCGGCGGCGGCATCCTGTCCGAATCGATGGCCGGGCTCGGCGCCCAGGTAAAAGGCATCGACCTGTCGACCGAA GCGCTCGGCGTGGCCGACCTGCACAGCCTCGAAAGCGGCATTTCGGTCGAGTACGAGGCGATCGCGGCCGAAGCGATCGC CGCGCGCGAACCGGGCACCTACGACGTCGTCACGTGCATGGAAATGCTCGAGCACGTACCGTCGCCCGGCGACATCGTGG CCGCGTGCGCGACGCTCGTGAAACCGGGCGGCTGGGTGTTCTTCTCGACGCTGAACCGCAACCTGAAGTCCTACCTGTTC GCCGTGATCGGCGCGGAATACATCGCGCAAATGCTGCCGAAGGGCACGCACGATTACGCGCGTTTCATCCGCCCGTCGGA ACTGGCCAGCTTCGTGCGCGCGACGGATCTGCACATCGTCGAGATCAAGGGCATCACGTACCACCCGATCGGCAAGCGCT TCGCGCTGTCGAACGACACCGATATCAACTACCTGGTTGCGTGCCGTCGCGGCGCGTGA
Upstream 100 bases:
>100_bases ACGCCCGTCCAGGCGCTCGCTGGCCTCGTCGTCCGCCCGCTTATATACTCGGGGCTGACGCACCGAAGCACCGCCCTCCT CTCGTAGCCCGTTTGCCGAC
Downstream 100 bases:
>100_bases CCCTCCAACCGGCATGACGACTCCCCTTTCGACCGCGCGGATCGCAGACGAACCGCGCCTGTTGCACTGCGATGCGGTCC TGTTCGATCTGGATGGCACG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTE ALGVADLHSLESGISVEYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKSYLF AVIGAEYIAQMLPKGTHDYARFIRPSELASFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA
Sequences:
>Translated_232_residues MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTE ALGVADLHSLESGISVEYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKSYLF AVIGAEYIAQMLPKGTHDYARFIRPSELASFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA >Mature_231_residues TNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGILSESMAGLGAQVKGIDLSTEA LGVADLHSLESGISVEYEAIAAEAIAAREPGTYDVVTCMEMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKSYLFA VIGAEYIAQMLPKGTHDYARFIRPSELASFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=32.7731092436975, Blast_Score=152, Evalue=2e-37, Organism=Escherichia coli, GI1788564, Length=225, Percent_Identity=57.7777777777778, Blast_Score=261, Evalue=4e-71, Organism=Caenorhabditis elegans, GI115533050, Length=234, Percent_Identity=32.4786324786325, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6324476, Length=282, Percent_Identity=28.7234042553192, Blast_Score=123, Evalue=2e-29, Organism=Drosophila melanogaster, GI281365311, Length=238, Percent_Identity=30.2521008403361, Blast_Score=124, Evalue=4e-29, Organism=Drosophila melanogaster, GI24585589, Length=199, Percent_Identity=33.1658291457286, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 25211; Mature: 25080
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCH LSESMAGLGAQVKGIDLSTEALGVADLHSLESGISVEYEAIAAEAIAAREPGTYDVVTCM HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCHHHHHHH EMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKSYLFAVIGAEYIAQMLPKGTHDYA HHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELASFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA HHCCHHHHHHHHHHCCEEEEEECCEEECCCCCEEECCCCCCCEEEEEEECCC >Mature Secondary Structure TNADPHELQKFSDLAHRWWDPNAEFKPLHDLNPVRLGWIDAHAHLAGKRALDIGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCH LSESMAGLGAQVKGIDLSTEALGVADLHSLESGISVEYEAIAAEAIAAREPGTYDVVTCM HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCHHHHHHH EMLEHVPSPGDIVAACATLVKPGGWVFFSTLNRNLKSYLFAVIGAEYIAQMLPKGTHDYA HHHHHCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RFIRPSELASFVRATDLHIVEIKGITYHPIGKRFALSNDTDINYLVACRRGA HHCCHHHHHHHHHHCCEEEEEECCEEECCCCCEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA