| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689059
Identifier: 116689059
GI number: 116689059
Start: 1148652
End: 1149005
Strand: Direct
Name: 116689059
Synonym: Bcen2424_1036
Alternate gene names: NA
Gene position: 1148652-1149005 (Clockwise)
Preceding gene: 116689058
Following gene: 116689063
Centisome position: 32.97
GC content: 66.38
Gene sequence:
>354_bases ATGAAGTCGCTCGTTCAAGCCGTTGTCGTTGCCGCTGCTCTCGTTGCCCCGGTCGTGTCGTTCGCCCAGTCGGGTTCGAC GATCACCCGTGCGCAGGTTCGTGCAGAACTGGTTCAACTCCAGCAGGCCGGTTACAACACCGCCCGCGGCGAAGATCCGC ATTATCCGGAAGCGATCCAGGCCGCAACGGCACGTATCGCGGAGCAGCAGCGCAGCGCGTTGGCGCAAGCGCAAGGCGCC GACGCCAGCGGCTACGGTGCGCAGGCACAGGGCGCTTCGGCGTCGGGTTCGCGCGCCATGGGCGTGCGCCCGGCCAGCGC GGAAGAAATGAAGTCGCTGTATCGCGGCAGCTAA
Upstream 100 bases:
>100_bases ACCTGCCTTATTCTTAAGCATCTACCTACATAAACTTCGGTTTGTCGGCGCTGATCAAGGTGTTCACCGCCGAATCAGAC AAATCTGGAGGTAGGTCATC
Downstream 100 bases:
>100_bases GCCGCACGTTGTCTGGGGTGGGCGAACGCGGGCGCGGCGATGCGTCGTGCCCGACGCCTGCCCCCCGGGCCGGCCGCCAT TCGGCGCAACCGATGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MKSLVQAVVVAAALVAPVVSFAQSGSTITRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARIAEQQRSALAQAQGA DASGYGAQAQGASASGSRAMGVRPASAEEMKSLYRGS
Sequences:
>Translated_117_residues MKSLVQAVVVAAALVAPVVSFAQSGSTITRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARIAEQQRSALAQAQGA DASGYGAQAQGASASGSRAMGVRPASAEEMKSLYRGS >Mature_117_residues MKSLVQAVVVAAALVAPVVSFAQSGSTITRAQVRAELVQLQQAGYNTARGEDPHYPEAIQAATARIAEQQRSALAQAQGA DASGYGAQAQGASASGSRAMGVRPASAEEMKSLYRGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11976; Mature: 11976
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLVQAVVVAAALVAPVVSFAQSGSTITRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AATARIAEQQRSALAQAQGADASGYGAQAQGASASGSRAMGVRPASAEEMKSLYRGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKSLVQAVVVAAALVAPVVSFAQSGSTITRAQVRAELVQLQQAGYNTARGEDPHYPEAIQ CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH AATARIAEQQRSALAQAQGADASGYGAQAQGASASGSRAMGVRPASAEEMKSLYRGS HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA