Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689048

Identifier: 116689048

GI number: 116689048

Start: 1134276

End: 1134974

Strand: Direct

Name: 116689048

Synonym: Bcen2424_1025

Alternate gene names: NA

Gene position: 1134276-1134974 (Clockwise)

Preceding gene: 116689047

Following gene: 116689050

Centisome position: 32.56

GC content: 66.38

Gene sequence:

>699_bases
TTGGCTTTCCGAAACTTTTCCCCTGCACGATGCGCAACGTGGATCGTTGCACTGGTTGCCTGCGCGCAAGCGGGCACGGC
CTGGTCCGCCGAGGCAACCGCCCCCGTCGCCGGTACGCGTCCGGCGGTCACGAGCCTGAGCGGCAGCGCGTCGCCTGCGG
CATCGGCCGCGGCCGAGACGGACGCCGCCGCGCAAGGCAACGTCGCCGAGCTGACGCAGATGCTGCACGACGGCCGGATC
GTCGAGATGCGTACGACGTACAACGGCAGCTACGGCGCGAGCCTGATGTTCGATCCGCGCGAGATGACGTATTACGTCGC
GCTGTTCCAGGACAAGAACCTGTGGCGCGTGATCCGTTCGCAGGAAAAGAATCGCGCGGAGATGGTGTACGCGAACTTCG
TCCAGCAGACCGCGCAGCTCGCCGATATCGAGATCCGCCGGACCGAGCTGCAGGCGCAGAAGGCATTTCTCGAACGCGTG
ATCGCGTTGCAGGCGAATCGTGCGCAGCAGTTGCAGGCCGACCTGAGCGTCGCGCGCAGCCAGCAGGCCGAAGTCGCGCA
GCGGCAGCGGTCGGCGCAGGAGCAGGCCCAGGCGCTGCAAGTCGAGAAGCGGGCTGCGCAGTTGCAATTGCGCGATCTGC
AGGAGCAGGTGCGGCAACTCGAGAGACAGACCGAGACGGGGCTGCCCATGCACAAGTAA

Upstream 100 bases:

>100_bases
GTGTTGGACGAAGGCTGGCCGCGTCCCGATAAATTCGAGATGCGGCCGTTTCGTTTTGAACGATAATCGCGAGTTCCGAT
TCGTTCGCCGGAGTCTGACG

Downstream 100 bases:

>100_bases
CGATTCGTCGAACGGACGGAGCGAGACGAACGAAAACCCGGCGAAGCGATCTTCGCCGGGTTTTTTATTGCGCGGGCGTC
AGTGCGCGAACGCGTCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Exported Lipoprotein; Molecular Chaperone; Exported Protein

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MAFRNFSPARCATWIVALVACAQAGTAWSAEATAPVAGTRPAVTSLSGSASPAASAAAETDAAAQGNVAELTQMLHDGRI
VEMRTTYNGSYGASLMFDPREMTYYVALFQDKNLWRVIRSQEKNRAEMVYANFVQQTAQLADIEIRRTELQAQKAFLERV
IALQANRAQQLQADLSVARSQQAEVAQRQRSAQEQAQALQVEKRAAQLQLRDLQEQVRQLERQTETGLPMHK

Sequences:

>Translated_232_residues
MAFRNFSPARCATWIVALVACAQAGTAWSAEATAPVAGTRPAVTSLSGSASPAASAAAETDAAAQGNVAELTQMLHDGRI
VEMRTTYNGSYGASLMFDPREMTYYVALFQDKNLWRVIRSQEKNRAEMVYANFVQQTAQLADIEIRRTELQAQKAFLERV
IALQANRAQQLQADLSVARSQQAEVAQRQRSAQEQAQALQVEKRAAQLQLRDLQEQVRQLERQTETGLPMHK
>Mature_231_residues
AFRNFSPARCATWIVALVACAQAGTAWSAEATAPVAGTRPAVTSLSGSASPAASAAAETDAAAQGNVAELTQMLHDGRIV
EMRTTYNGSYGASLMFDPREMTYYVALFQDKNLWRVIRSQEKNRAEMVYANFVQQTAQLADIEIRRTELQAQKAFLERVI
ALQANRAQQLQADLSVARSQQAEVAQRQRSAQEQAQALQVEKRAAQLQLRDLQEQVRQLERQTETGLPMHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25656; Mature: 25525

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRNFSPARCATWIVALVACAQAGTAWSAEATAPVAGTRPAVTSLSGSASPAASAAAET
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHC
DAAAQGNVAELTQMLHDGRIVEMRTTYNGSYGASLMFDPREMTYYVALFQDKNLWRVIRS
CCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCEEEECHHHHEEEEEEECCCHHHHHHHH
QEKNRAEMVYANFVQQTAQLADIEIRRTELQAQKAFLERVIALQANRAQQLQADLSVARS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QQAEVAQRQRSAQEQAQALQVEKRAAQLQLRDLQEQVRQLERQTETGLPMHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AFRNFSPARCATWIVALVACAQAGTAWSAEATAPVAGTRPAVTSLSGSASPAASAAAET
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHC
DAAAQGNVAELTQMLHDGRIVEMRTTYNGSYGASLMFDPREMTYYVALFQDKNLWRVIRS
CCCCCCCHHHHHHHHHCCEEEEEEEECCCCCCCEEEECHHHHEEEEEEECCCHHHHHHHH
QEKNRAEMVYANFVQQTAQLADIEIRRTELQAQKAFLERVIALQANRAQQLQADLSVARS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QQAEVAQRQRSAQEQAQALQVEKRAAQLQLRDLQEQVRQLERQTETGLPMHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA