Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689001

Identifier: 116689001

GI number: 116689001

Start: 1087814

End: 1088083

Strand: Reverse

Name: 116689001

Synonym: Bcen2424_0978

Alternate gene names: NA

Gene position: 1088083-1087814 (Counterclockwise)

Preceding gene: 116689003

Following gene: 116688997

Centisome position: 31.23

GC content: 60.74

Gene sequence:

>270_bases
ATGACCATCGAACTCGACAAGGATGTACGCGACCGCGCGATCGCGTCGCTGCAACGCTATTTCACGGAAAACATGGACGA
GCCGATCGGCAACATCCAGGCCGGCGCACTGCTGCATTTCTTCATTCAGGAAGTCGCGCCGGCGATCTACAACCTCGCGG
TCGCCGACGCGCAGGAACGCCTGCATGCGCGGGTGGCCGAACTCGACATCGAATGCCACGAAGAGCCGTTCGAATACTGG
AAGCAACAGCAACCGGCCCGCAAGCGCTGA

Upstream 100 bases:

>100_bases
GCGCGCGTCGCCATGACGGATCACGACACGACCGCGCCGGCTGGCGGCGACCGAATCAGGCGGAGCGCCGACTCCGCGTC
ACAGCACACCTGGGAATCCG

Downstream 100 bases:

>100_bases
CGCCTGAGCGGCGACGCAAGTCGAACCGGCCCGCGCGGCGCCGTCAGTCCTTCTTGCCGGCCTCGCGATCGAGCTCGCGC
AGCCAGGCGAGCTTCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTIELDKDVRDRAIASLQRYFTENMDEPIGNIQAGALLHFFIQEVAPAIYNLAVADAQERLHARVAELDIECHEEPFEYW
KQQQPARKR

Sequences:

>Translated_89_residues
MTIELDKDVRDRAIASLQRYFTENMDEPIGNIQAGALLHFFIQEVAPAIYNLAVADAQERLHARVAELDIECHEEPFEYW
KQQQPARKR
>Mature_88_residues
TIELDKDVRDRAIASLQRYFTENMDEPIGNIQAGALLHFFIQEVAPAIYNLAVADAQERLHARVAELDIECHEEPFEYWK
QQQPARKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10384; Mature: 10253

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIELDKDVRDRAIASLQRYFTENMDEPIGNIQAGALLHFFIQEVAPAIYNLAVADAQER
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHARVAELDIECHEEPFEYWKQQQPARKR
HHHHHHHHHHHCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
TIELDKDVRDRAIASLQRYFTENMDEPIGNIQAGALLHFFIQEVAPAIYNLAVADAQER
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHARVAELDIECHEEPFEYWKQQQPARKR
HHHHHHHHHHHCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA