| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is zwf [H]
Identifier: 116688990
GI number: 116688990
Start: 1073920
End: 1075389
Strand: Reverse
Name: zwf [H]
Synonym: Bcen2424_0967
Alternate gene names: 116688990
Gene position: 1075389-1073920 (Counterclockwise)
Preceding gene: 116688995
Following gene: 116688989
Centisome position: 30.87
GC content: 66.53
Gene sequence:
>1470_bases ATGCATACCGATTCCAGCTTTACCTTCGTACTTTTCGGCGGCACCGGCGATTTGTCGATGCGCAAGATCCTGCCCGCGCT GTTCGAAGCGCACCGTGCGAACATGCTGGCGGACGGCGGTCGGATCGTGGCCGTCGCACGACACGAATCGGATCGGGCGG GCTATCTCGAATGGGTCGACACGCACGTGAAGCCGCATGCGGCGAAGGCGGCCGGCAACGCGTTCGACGACGCGGCCTGG AAGTCGTTTCTCGACCGCATCGAGTACGTGAAGCTCGATCTCGGCCGCGCGGAGGACTACGTCGTGCTGCGCGACGCGAT CGCATCGCTGCCCGGCATCCGCGTGTTCTATCTCGCGACCGGCCCGTCGCTGTTCGTGCCGATCTGCAAGGCGCTCGCGT CGGTCGGCCTGAACGAAGGCTCGCGCATCGTGCTGGAGAAGCCGCTCGGCTACGACCTGAAGTCGTCCAACGCGATCAAC GACGCGGTCGGCGAGATCTTCGCGGAAGGCCAGATCTACCGGATCGACCACTACCTCGGCAAGGAGCCGGTACAGAACCT GCTCGCGCTGCGCTTCGGCAATGCGCTGTTCGAGCCGCTGTGGCGCCGCGAATGGGTCGAGAGCATCCAGATCACGATCG CGGAAGAGCTCGGCGTCGAGGCGCGCGGCGATTTCTACGACAATACGGGCGCGCTGCGCGACATGGTGCAGAACCACCTG CTCCAGCTGCTGTCGATCGTCGCGATGGAGCCGCCGCACTCGATGGATTCCGACTCGGTACGCGACGAGAAGCTGCGCGT GCTGCGCGCGCTGAAGCCGATCGATCCGCGCGACATCGGCAAGGTCGCGGTGCGCGGCCAGTATCATGCGGGCGTGATCA AAGGCGCGCAGGTGCCGGCCTACGCGACCGAGCCGGGCGTGAAGCCCGACAGCCAGACCGAAACCTTCGTCGCGCTGAAG GTCGAGATCGAGAACTGGCGCTGGGCCGGCGTGCCGTTCTTCCTGCGCACCGGCAAGCGTCTGGCCGACCGCGTCGCGGA GATCGTCGTCAACTTCCGCCCGGTGCCGCATTCGGCGCTCGGGCCGACCGCGCTGCGCCCCGGTTCGAACCGTCTCGTGA TCCGGCTGCAGCCGAACGAGACGATCCGCCTGTACTGCCTCGCGAAACAGCCGGGCGAAGGGATGAACCTCGCGAGCGTG CACCTCGACCTCGCGTTCGACCAGTTCTTCAAGGAAGGGCAGATGGAGGCGTACCAGCGCCTGCTGCTCGACGTGATCAA CGGCCGGCTCGCCCTGTTCGTGCGTCGCGACGAGCAGGAAGCCGCCTGGCAATGGGTCGAGCCGATCCTGAACGAATGGG CGCGCACGCTCAAGCCGCCGAAGCCGTACGCGGCGGGCACGTGGGGGCCGGCCGCGTCGAGCGCGATGCTCGCGCAGCAC GACACCTGCTGGCTCGAAGAAGAAAACTGA
Upstream 100 bases:
>100_bases TACCCCTTGCGGCGGATTGTAGTTAAACTACAATTCAGTGTCAAAAATATTTTTATCGCACTACGGATCGCTTCCAGCAC CCCCAACACGGCGGAGACAC
Downstream 100 bases:
>100_bases TGCAAACCGTTGCGGCGTACGCCACCGTACGCGGCAACGCGCCTCACGATTCGTACGATTTGAACAGACAAAGCAGTCCG GAGGAGATGTGATCGAGATC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLADGGRIVAVARHESDRAGYLEWVDTHVKPHAAKAAGNAFDDAAW KSFLDRIEYVKLDLGRAEDYVVLRDAIASLPGIRVFYLATGPSLFVPICKALASVGLNEGSRIVLEKPLGYDLKSSNAIN DAVGEIFAEGQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPIDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKPDSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRPGSNRLVIRLQPNETIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWQWVEPILNEWARTLKPPKPYAAGTWGPAASSAMLAQH DTCWLEEEN
Sequences:
>Translated_489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLADGGRIVAVARHESDRAGYLEWVDTHVKPHAAKAAGNAFDDAAW KSFLDRIEYVKLDLGRAEDYVVLRDAIASLPGIRVFYLATGPSLFVPICKALASVGLNEGSRIVLEKPLGYDLKSSNAIN DAVGEIFAEGQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPIDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKPDSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRPGSNRLVIRLQPNETIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWQWVEPILNEWARTLKPPKPYAAGTWGPAASSAMLAQH DTCWLEEEN >Mature_489_residues MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLADGGRIVAVARHESDRAGYLEWVDTHVKPHAAKAAGNAFDDAAW KSFLDRIEYVKLDLGRAEDYVVLRDAIASLPGIRVFYLATGPSLFVPICKALASVGLNEGSRIVLEKPLGYDLKSSNAIN DAVGEIFAEGQIYRIDHYLGKEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPIDPRDIGKVAVRGQYHAGVIKGAQVPAYATEPGVKPDSQTETFVALK VEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSALGPTALRPGSNRLVIRLQPNETIRLYCLAKQPGEGMNLASV HLDLAFDQFFKEGQMEAYQRLLLDVINGRLALFVRRDEQEAAWQWVEPILNEWARTLKPPKPYAAGTWGPAASSAMLAQH DTCWLEEEN
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=490, Percent_Identity=35.5102040816327, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI109389365, Length=490, Percent_Identity=35.5102040816327, Blast_Score=295, Evalue=5e-80, Organism=Homo sapiens, GI52145310, Length=364, Percent_Identity=34.0659340659341, Blast_Score=157, Evalue=1e-38, Organism=Escherichia coli, GI1788158, Length=491, Percent_Identity=43.7881873727088, Blast_Score=423, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17538218, Length=490, Percent_Identity=35.3061224489796, Blast_Score=312, Evalue=2e-85, Organism=Saccharomyces cerevisiae, GI6324088, Length=488, Percent_Identity=35.4508196721311, Blast_Score=293, Evalue=5e-80, Organism=Drosophila melanogaster, GI24643350, Length=488, Percent_Identity=35.4508196721311, Blast_Score=290, Evalue=1e-78, Organism=Drosophila melanogaster, GI24643352, Length=488, Percent_Identity=35.4508196721311, Blast_Score=290, Evalue=2e-78, Organism=Drosophila melanogaster, GI221513548, Length=486, Percent_Identity=30.6584362139918, Blast_Score=213, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54571; Mature: 54571
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLADGGRIVAVARHESDRAGYLEWVD CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCHHHHHH THVKPHAAKAAGNAFDDAAWKSFLDRIEYVKLDLGRAEDYVVLRDAIASLPGIRVFYLAT HCCCCCHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHCCCCEEEEEEC GPSLFVPICKALASVGLNEGSRIVLEKPLGYDLKSSNAINDAVGEIFAEGQIYRIDHYLG CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHCC KEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHH LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPIDPRDIGKVAVRGQYHAGVIKGAQVPA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCC YATEPGVKPDSQTETFVALKVEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSAL CCCCCCCCCCCCCCEEEEEEEEECCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC GPTALRPGSNRLVIRLQPNETIRLYCLAKQPGEGMNLASVHLDLAFDQFFKEGQMEAYQR CCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHH LLLDVINGRLALFVRRDEQEAAWQWVEPILNEWARTLKPPKPYAAGTWGPAASSAMLAQH HHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC DTCWLEEEN CCEEEECCC >Mature Secondary Structure MHTDSSFTFVLFGGTGDLSMRKILPALFEAHRANMLADGGRIVAVARHESDRAGYLEWVD CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCEEECCCEEEEEEECCCCCCCHHHHHH THVKPHAAKAAGNAFDDAAWKSFLDRIEYVKLDLGRAEDYVVLRDAIASLPGIRVFYLAT HCCCCCHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCEEHHHHHHHHCCCCEEEEEEC GPSLFVPICKALASVGLNEGSRIVLEKPLGYDLKSSNAINDAVGEIFAEGQIYRIDHYLG CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHCC KEPVQNLLALRFGNALFEPLWRREWVESIQITIAEELGVEARGDFYDNTGALRDMVQNHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCHHHHHHHHHHH LQLLSIVAMEPPHSMDSDSVRDEKLRVLRALKPIDPRDIGKVAVRGQYHAGVIKGAQVPA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCC YATEPGVKPDSQTETFVALKVEIENWRWAGVPFFLRTGKRLADRVAEIVVNFRPVPHSAL CCCCCCCCCCCCCCEEEEEEEEECCEEECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC GPTALRPGSNRLVIRLQPNETIRLYCLAKQPGEGMNLASVHLDLAFDQFFKEGQMEAYQR CCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCHHHHHHH LLLDVINGRLALFVRRDEQEAAWQWVEPILNEWARTLKPPKPYAAGTWGPAASSAMLAQH HHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCC DTCWLEEEN CCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]