Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688970

Identifier: 116688970

GI number: 116688970

Start: 1054019

End: 1054369

Strand: Direct

Name: 116688970

Synonym: Bcen2424_0947

Alternate gene names: NA

Gene position: 1054019-1054369 (Clockwise)

Preceding gene: 116688969

Following gene: 116688973

Centisome position: 30.25

GC content: 66.38

Gene sequence:

>351_bases
ATGGACAGGGTCTTTTTACGCTTCTATGTGCACGAGCGGCACCGGCTGCACCGCAAGCCGCTGTGGGAATGGCTGCTGGA
AGAGGCGAACCGGATGGGCGTCGCGGGCGGTTCCGCGTTTCGCGCGATGGCCGGTTTCGGCCAGCATCGCGTGCTGCACG
AGGATCGCTTCTTCGAACTGCAGGGTTCGCTCGCGATCGAGGTCGAATTCGTCGTCACCGAGGACGAAGCGCAGCGGCTG
CTCGAGCGGCTGTCGCGCGAGAAAGTGCGGGTGTGCTACGCGATGATGCCGGCGCAGTTCGGCGTGATCGACACGCTTGG
CGCACCGCCGGCGCAGGGGCCGGCGGCATAG

Upstream 100 bases:

>100_bases
CCTACACTTGACTGGATCGTTCGCGCTGACGGCGCTCGGCATGTGGACCGCGCGCGCGTGGCTCGCGGCGGCCTGAGCGG
GGCCGCCATCGGAGGGGGCG

Downstream 100 bases:

>100_bases
GGCGTCGCGCCGATCAGATGCCGAACATCGTCAGCGACACGGCGGCGCGCGTGACGATCATCAGCAGCACCTGCACGATC
ACGAACAGCAGGATCGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL
LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA

Sequences:

>Translated_116_residues
MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL
LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA
>Mature_116_residues
MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL
LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA

Specific function: Unknown

COG id: COG1993

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13353; Mature: 13353

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL
CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE
QGSLAIEVEFVVTEDEAQRLLERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA
CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL
CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE
QGSLAIEVEFVVTEDEAQRLLERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA
CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA