| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688970
Identifier: 116688970
GI number: 116688970
Start: 1054019
End: 1054369
Strand: Direct
Name: 116688970
Synonym: Bcen2424_0947
Alternate gene names: NA
Gene position: 1054019-1054369 (Clockwise)
Preceding gene: 116688969
Following gene: 116688973
Centisome position: 30.25
GC content: 66.38
Gene sequence:
>351_bases ATGGACAGGGTCTTTTTACGCTTCTATGTGCACGAGCGGCACCGGCTGCACCGCAAGCCGCTGTGGGAATGGCTGCTGGA AGAGGCGAACCGGATGGGCGTCGCGGGCGGTTCCGCGTTTCGCGCGATGGCCGGTTTCGGCCAGCATCGCGTGCTGCACG AGGATCGCTTCTTCGAACTGCAGGGTTCGCTCGCGATCGAGGTCGAATTCGTCGTCACCGAGGACGAAGCGCAGCGGCTG CTCGAGCGGCTGTCGCGCGAGAAAGTGCGGGTGTGCTACGCGATGATGCCGGCGCAGTTCGGCGTGATCGACACGCTTGG CGCACCGCCGGCGCAGGGGCCGGCGGCATAG
Upstream 100 bases:
>100_bases CCTACACTTGACTGGATCGTTCGCGCTGACGGCGCTCGGCATGTGGACCGCGCGCGCGTGGCTCGCGGCGGCCTGAGCGG GGCCGCCATCGGAGGGGGCG
Downstream 100 bases:
>100_bases GGCGTCGCGCCGATCAGATGCCGAACATCGTCAGCGACACGGCGGCGCGCGTGACGATCATCAGCAGCACCTGCACGATC ACGAACAGCAGGATCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA
Sequences:
>Translated_116_residues MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA >Mature_116_residues MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFELQGSLAIEVEFVVTEDEAQRL LERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13353; Mature: 13353
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE QGSLAIEVEFVVTEDEAQRLLERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MDRVFLRFYVHERHRLHRKPLWEWLLEEANRMGVAGGSAFRAMAGFGQHRVLHEDRFFEL CCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEECCCCEEEE QGSLAIEVEFVVTEDEAQRLLERLSREKVRVCYAMMPAQFGVIDTLGAPPAQGPAA CCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA