| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is crcB [H]
Identifier: 116688969
GI number: 116688969
Start: 1053608
End: 1053994
Strand: Direct
Name: crcB [H]
Synonym: Bcen2424_0946
Alternate gene names: 116688969
Gene position: 1053608-1053994 (Clockwise)
Preceding gene: 116688967
Following gene: 116688970
Centisome position: 30.24
GC content: 66.93
Gene sequence:
>387_bases TTGTTCTATTCGATCGTCGCGATCTTCGTCGGCGCCGGCCTCGGCGCGTTGCTGCGCTGGTTCCTGAGCCTCGCGCTCAA CGCCTTCTTTCCCGCGGTGCCGCTCGGCACGCTCGCGTCGAACCTGATCGGCGGCTACGTGATCGGCGTGGCCGCCGTCG TGTTCACGGTCCGCGTCGGGTTGCCACCCGAGTGGCGGCTGTTCGTGATCACGGGCTTTCTCGGTGGCCTCACGACGTTT TCGACCTATTCGGTCGAAGTGATGACGCACGCGCTCGAGGGCGAATTCGGATGGGCGTTGGCGGTGGCTGCCCTACACTT GACTGGATCGTTCGCGCTGACGGCGCTCGGCATGTGGACCGCGCGCGCGTGGCTCGCGGCGGCCTGA
Upstream 100 bases:
>100_bases CTGCTGACCCGGCCCGTCGGCATTGCCGGCGCGGCGCGATTCCGCATACAGTTCAGCGTAGGCCGCGTGCGCCGCGCGGC GCCGACCATGAGGGGTGCCC
Downstream 100 bases:
>100_bases GCGGGGCCGCCATCGGAGGGGGCGATGGACAGGGTCTTTTTACGCTTCTATGTGCACGAGCGGCACCGGCTGCACCGCAA GCCGCTGTGGGAATGGCTGC
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MFYSIVAIFVGAGLGALLRWFLSLALNAFFPAVPLGTLASNLIGGYVIGVAAVVFTVRVGLPPEWRLFVITGFLGGLTTF STYSVEVMTHALEGEFGWALAVAALHLTGSFALTALGMWTARAWLAAA
Sequences:
>Translated_128_residues MFYSIVAIFVGAGLGALLRWFLSLALNAFFPAVPLGTLASNLIGGYVIGVAAVVFTVRVGLPPEWRLFVITGFLGGLTTF STYSVEVMTHALEGEFGWALAVAALHLTGSFALTALGMWTARAWLAAA >Mature_128_residues MFYSIVAIFVGAGLGALLRWFLSLALNAFFPAVPLGTLASNLIGGYVIGVAAVVFTVRVGLPPEWRLFVITGFLGGLTTF STYSVEVMTHALEGEFGWALAVAALHLTGSFALTALGMWTARAWLAAA
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=119, Percent_Identity=47.0588235294118, Blast_Score=112, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13483; Mature: 13483
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYSIVAIFVGAGLGALLRWFLSLALNAFFPAVPLGTLASNLIGGYVIGVAAVVFTVRVG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LPPEWRLFVITGFLGGLTTFSTYSVEVMTHALEGEFGWALAVAALHLTGSFALTALGMWT CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARAWLAAA HHHHHHCC >Mature Secondary Structure MFYSIVAIFVGAGLGALLRWFLSLALNAFFPAVPLGTLASNLIGGYVIGVAAVVFTVRVG CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC LPPEWRLFVITGFLGGLTTFSTYSVEVMTHALEGEFGWALAVAALHLTGSFALTALGMWT CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARAWLAAA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA