| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mmlH [H]
Identifier: 116688959
GI number: 116688959
Start: 1044337
End: 1045659
Strand: Direct
Name: mmlH [H]
Synonym: Bcen2424_0936
Alternate gene names: 116688959
Gene position: 1044337-1045659 (Clockwise)
Preceding gene: 116688956
Following gene: 116688960
Centisome position: 29.98
GC content: 70.37
Gene sequence:
>1323_bases ATGTTCAAGGCGATCGACGCGTCGGCGGCCGGCGCGAAGCCGCGGCGCACGCCGCTCACGCGCGAGCAGGTGAAGGGTTT CTGGGCCGTGTACGCGGGCTGGGTGCTCGACGGCGTGGATTCGGTGATCTACGCGCTCGTGCTGATTCCCGCGCTGACGG AATTGCTGCCGGCGTCCGGCATCGCGGCGACGCCCGCGAACCTGGGGATGTACGGCTCGATCCTGTTCGCGCTGTTCCTG ATCGGCTGGGGGCTGTCGTTCATCTGGGGGCCGCTCGCCGATCGCTTCGGCCGCGTGCGCACGCTCGCGGCGAGCATCCT GATCTATTCGGTGTTCACCGGCGCGGCCGCGTTCGTGCACGACGTGTGGGCGCTGGCCGCGTGCCGGCTGATCGCCGGGA TCGGCGTCGGCGGCGAATGGGCGCTCGCCGGTACCTACGTCGCCGAGAGCTGGCCGGAAGATCGCCGCAAGATGGGCGCC GGCTACCTGCAGACGGGCTACTACTTCGGCTTCTTCATCGCGGCCTGCCTGAACTACACGATCGGCGCGACCTACGGCTG GCGCGCGATGTTCCTGTGCGGGCTGGCGCCCGCGCTGCTCGCGGTGTTCACGGTGACGCGCGTGAAGGAGCCGGGGCAGT GGCGGCGGCACGACGCGCGCGACGGCGACGTGGCTGACGCGCGGCGCGCGCATCCGCTGCGCGAGATCTTCGCGCCGGCG TTCCGGCGTCGTACGCTGACGAGCGCGAGCCTCGTCGGCGTTGCGATCGTCGGGCTGTGGGCCGGCTCCGTCTACGAGGC GAGCGCGGTCACCACGCTGGCGGCGCGCGCGGGCATCGATCACGTCGGCGCGCTGCGGCTTGCGTCGATCGGCGCGGCGA TCCTGTCGTGCGCGACGATTGCCGGCTGCCTGGTGGCGCCGTGGCTGTCGGAACGGCTCGGCCGGCGTACCGCGCTCGGC GTGTATTTCGCGGGGATGGCCGCATCGATCGTGTTCGCGTTCGGCTGGGCGTTCTACCAGCCGAACGGGCTCGCCGCGTT CATGGTGTCGCTCGCGTTCCTCGGCTTCTTCGGCGGCAACTTCGCGATCTTCTCGCTGTGGTTGCCCGAGCAATATCCGA CGCGCGTGCGGGCCACCGCATTTGCGTTCAACGCGTCGGTCGGTCGCTTCATCGGCGCGGGCGTGAACTTCCTGCTCGGC GCCGCGATTCACGGTTACGGATCGCTCGGCGTGCCGGTCGCATGGACCGCGGCCGTGTTCGGGCTCGGCGTCCTGATTCT GCCGTTCGCGGTCGAGACGCGACATCAGACGCTGCCCGAATGA
Upstream 100 bases:
>100_bases TCGATAGCGTTTCTATACTCGTCTCACAAAAGAGCCCGACTGCCGGCCATTCCGGACCGGACGCGGCGCAAGAGCCGGCC CCGCCGGCAAGGAGACGAAG
Downstream 100 bases:
>100_bases GCGAAATGCCGCAGTCGTTCGGAAACAAGACGAGACATACCCATCAATATCAGGAGTCCGGAATGCAGGCATTAACGGGA ATCAAGGTCGTCGATCTGAG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MFKAIDASAAGAKPRRTPLTREQVKGFWAVYAGWVLDGVDSVIYALVLIPALTELLPASGIAATPANLGMYGSILFALFL IGWGLSFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVHDVWALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGA GYLQTGYYFGFFIAACLNYTIGATYGWRAMFLCGLAPALLAVFTVTRVKEPGQWRRHDARDGDVADARRAHPLREIFAPA FRRRTLTSASLVGVAIVGLWAGSVYEASAVTTLAARAGIDHVGALRLASIGAAILSCATIAGCLVAPWLSERLGRRTALG VYFAGMAASIVFAFGWAFYQPNGLAAFMVSLAFLGFFGGNFAIFSLWLPEQYPTRVRATAFAFNASVGRFIGAGVNFLLG AAIHGYGSLGVPVAWTAAVFGLGVLILPFAVETRHQTLPE
Sequences:
>Translated_440_residues MFKAIDASAAGAKPRRTPLTREQVKGFWAVYAGWVLDGVDSVIYALVLIPALTELLPASGIAATPANLGMYGSILFALFL IGWGLSFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVHDVWALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGA GYLQTGYYFGFFIAACLNYTIGATYGWRAMFLCGLAPALLAVFTVTRVKEPGQWRRHDARDGDVADARRAHPLREIFAPA FRRRTLTSASLVGVAIVGLWAGSVYEASAVTTLAARAGIDHVGALRLASIGAAILSCATIAGCLVAPWLSERLGRRTALG VYFAGMAASIVFAFGWAFYQPNGLAAFMVSLAFLGFFGGNFAIFSLWLPEQYPTRVRATAFAFNASVGRFIGAGVNFLLG AAIHGYGSLGVPVAWTAAVFGLGVLILPFAVETRHQTLPE >Mature_440_residues MFKAIDASAAGAKPRRTPLTREQVKGFWAVYAGWVLDGVDSVIYALVLIPALTELLPASGIAATPANLGMYGSILFALFL IGWGLSFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVHDVWALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGA GYLQTGYYFGFFIAACLNYTIGATYGWRAMFLCGLAPALLAVFTVTRVKEPGQWRRHDARDGDVADARRAHPLREIFAPA FRRRTLTSASLVGVAIVGLWAGSVYEASAVTTLAARAGIDHVGALRLASIGAAILSCATIAGCLVAPWLSERLGRRTALG VYFAGMAASIVFAFGWAFYQPNGLAAFMVSLAFLGFFGGNFAIFSLWLPEQYPTRVRATAFAFNASVGRFIGAGVNFLLG AAIHGYGSLGVPVAWTAAVFGLGVLILPFAVETRHQTLPE
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI216548223, Length=134, Percent_Identity=31.3432835820896, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI87082404, Length=409, Percent_Identity=25.4278728606357, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87082231, Length=211, Percent_Identity=31.7535545023697, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1790550, Length=324, Percent_Identity=26.5432098765432, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786229, Length=421, Percent_Identity=24.2280285035629, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46859; Mature: 46859
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKAIDASAAGAKPRRTPLTREQVKGFWAVYAGWVLDGVDSVIYALVLIPALTELLPASG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IAATPANLGMYGSILFALFLIGWGLSFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVWALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGAGYLQTGYYFGFFIAACLNYT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH IGATYGWRAMFLCGLAPALLAVFTVTRVKEPGQWRRHDARDGDVADARRAHPLREIFAPA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHCCHHHHHHHHH FRRRTLTSASLVGVAIVGLWAGSVYEASAVTTLAARAGIDHVGALRLASIGAAILSCATI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGCLVAPWLSERLGRRTALGVYFAGMAASIVFAFGWAFYQPNGLAAFMVSLAFLGFFGGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC FAIFSLWLPEQYPTRVRATAFAFNASVGRFIGAGVNFLLGAAIHGYGSLGVPVAWTAAVF EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GLGVLILPFAVETRHQTLPE HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFKAIDASAAGAKPRRTPLTREQVKGFWAVYAGWVLDGVDSVIYALVLIPALTELLPASG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IAATPANLGMYGSILFALFLIGWGLSFIWGPLADRFGRVRTLAASILIYSVFTGAAAFVH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVWALAACRLIAGIGVGGEWALAGTYVAESWPEDRRKMGAGYLQTGYYFGFFIAACLNYT HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH IGATYGWRAMFLCGLAPALLAVFTVTRVKEPGQWRRHDARDGDVADARRAHPLREIFAPA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHCCHHHHHHHHH FRRRTLTSASLVGVAIVGLWAGSVYEASAVTTLAARAGIDHVGALRLASIGAAILSCATI HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH AGCLVAPWLSERLGRRTALGVYFAGMAASIVFAFGWAFYQPNGLAAFMVSLAFLGFFGGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC FAIFSLWLPEQYPTRVRATAFAFNASVGRFIGAGVNFLLGAAIHGYGSLGVPVAWTAAVF EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GLGVLILPFAVETRHQTLPE HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]