| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is pgm [H]
Identifier: 116688916
GI number: 116688916
Start: 1002717
End: 1004186
Strand: Direct
Name: pgm [H]
Synonym: Bcen2424_0893
Alternate gene names: 116688916
Gene position: 1002717-1004186 (Clockwise)
Preceding gene: 116688910
Following gene: 116688917
Centisome position: 28.78
GC content: 66.6
Gene sequence:
>1470_bases ATGCGCGGCACCCGTGAGCGGCGGCCCGCGCAAGCCAGACAATTTTCCATGCACGCAACTGAGAGAAGAGAATCGATGAT CTCCCAATCCATCTTCAAGGCATATGACATTCGTGGCGTGGTCGGCAAGACACTCGACGTCGACACGGCGCGCGGAATCG GCCGGGCATTCGGCAGCGAAGTCCGTGCGCAGGGCGGCGATGCGGTCGTCGTCGCGCGCGACGGCCGCCTGTCCGGGCCG GAACTGGTCGGCGCGCTGGCCGACGGCCTGCGTGCGGCCGGGGTCGACGTCGTCGACGTCGGCATGGTGCCGACGCCGGT CGGTTATTTCGCGGCGAACGTGCCGCTGGCGCTGAAGGGCGGCGAGCGCCGCGTCGATTCGTGCATCGTCGTCACGGGCA GTCACAATCCGCCCGACTACAACGGCTTCAAGATGGTGCTGCGCGGCGCCGCGATCTACGGCGAGCAGATCCAGGCGCTG TACCGCCGCATCGTCGACGAGCGGTTCGAGTCCGGCAGCGGCACCTATGAGCAGATCGACGTCGCGGATCAATACATCGC GCGCATCGTCGGCGACGTGAAGCTCGCGCGGCCGCTGAAGATCGTGGTCGACGCCGGCAACGGCGTCGCAGGCCCCCTCG CGACGCGCCTGTTCAAGGCGCTCGGCTGCGAACTCGTCGAGCGCTTCACCGACATCGACGGCACGTTCCCGAACCATCAC CCCGATCCCGCCCACCCGGAAAACCTGCAGGACGTGATCCAGGCGCTGAAGGACACCGATGCGGAACTCGGCTTCGCGTT CGACGGCGACGGCGACCGCCTGGGCGTCGTCACGAAGGACGGCCAGATCATCTATCCGGACCGCCAGCTGATGCTGTTCG CGGAAGAAGTGCTGTCGCGCAACCCGGGCGCGCAGATCATCTACGACGTGAAGTGCACGCGCCACCTCGCGCAGTGGGTG AAGTCGAAGGGCGGCGAGCCGCTGATGTGGAAGACGGGTCACTCGCTCGTGAAGGCGAAGCTGCGCGAGACGGGTGCGCC GCTCGCCGGCGAAATGAGCGGCCACGTGTTCTTCAAGGATCGCTGGTACGGCTTCGACGACGGCCTGTACACCGGTGCGC GCCTGCTCGAGATTCTCGCGAAGACGGCCGATCCGAGCGCGCTGCTCAACAGCCTGCCGGACGCGATGAGCACGCCGGAA CTGCAGCTCTGGCTCGACGAAGGCGAGAATTTCCGCCTGATCGAGCAGTTGCAGAAAGAGGCGAAGTTCGACGGCGCCGA TGAAGTCGTGACGATCGACGGCCTGCGTGTCGAGTACCCGGACGGCTTCGGCCTCGCGCGTTCGTCGAACACGACGCCGG TCGTCGTGATGCGCTTCGAGGCCGAGACGCAGGAAGGGCTCAAGCGCATCCAGGAAGACTTCCGCCGCGTGCTGACGGCC GCGAAGCCGGACGTCAAGCTGCCGTTCTGA
Upstream 100 bases:
>100_bases TTAAAATGGGCGACATGCGCGTCATCAAAACCCGCGATTATAAGTGGGATCGCGGCTGCTCCAGCCGTTGTGCGCGGTGT TCCGCCGGCAGGCATGTATC
Downstream 100 bases:
>100_bases GCGCCGGCGGCCGGCGGGCCGCCCGTACGACGGCCGGTTCGTCGGCCGTGTTTGTCTCGAAAAGCGGCGCGTGCCCCGGG CGCGCGGCCGCTTTTTGTCT
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRGTRERRPAQARQFSMHATERRESMISQSIFKAYDIRGVVGKTLDVDTARGIGRAFGSEVRAQGGDAVVVARDGRLSGP ELVGALADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQAL YRRIVDERFESGSGTYEQIDVADQYIARIVGDVKLARPLKIVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHH PDPAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWV KSKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNSLPDAMSTPE LQLWLDEGENFRLIEQLQKEAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFEAETQEGLKRIQEDFRRVLTA AKPDVKLPF
Sequences:
>Translated_489_residues MRGTRERRPAQARQFSMHATERRESMISQSIFKAYDIRGVVGKTLDVDTARGIGRAFGSEVRAQGGDAVVVARDGRLSGP ELVGALADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQAL YRRIVDERFESGSGTYEQIDVADQYIARIVGDVKLARPLKIVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHH PDPAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWV KSKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNSLPDAMSTPE LQLWLDEGENFRLIEQLQKEAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFEAETQEGLKRIQEDFRRVLTA AKPDVKLPF >Mature_489_residues MRGTRERRPAQARQFSMHATERRESMISQSIFKAYDIRGVVGKTLDVDTARGIGRAFGSEVRAQGGDAVVVARDGRLSGP ELVGALADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQAL YRRIVDERFESGSGTYEQIDVADQYIARIVGDVKLARPLKIVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHH PDPAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRHLAQWV KSKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILAKTADPSALLNSLPDAMSTPE LQLWLDEGENFRLIEQLQKEAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFEAETQEGLKRIQEDFRRVLTA AKPDVKLPF
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1788361, Length=471, Percent_Identity=36.3057324840764, Blast_Score=222, Evalue=4e-59, Organism=Escherichia coli, GI1789566, Length=480, Percent_Identity=27.2916666666667, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 53588; Mature: 53588
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGTRERRPAQARQFSMHATERRESMISQSIFKAYDIRGVVGKTLDVDTARGIGRAFGSE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHH VRAQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKG HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEECC GERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVDERFESGSGTYEQID CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VADQYIARIVGDVKLARPLKIVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHH HHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDPAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSR CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCC NPGAQIIYDVKCTRHLAQWVKSKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKD CCCCCEEEEHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEC RWYGFDDGLYTGARLLEILAKTADPSALLNSLPDAMSTPELQLWLDEGENFRLIEQLQKE CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHH AKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFEAETQEGLKRIQEDFRRVLTA HCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH AKPDVKLPF CCCCCCCCC >Mature Secondary Structure MRGTRERRPAQARQFSMHATERRESMISQSIFKAYDIRGVVGKTLDVDTARGIGRAFGSE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHH VRAQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAANVPLALKG HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEECC GERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGEQIQALYRRIVDERFESGSGTYEQID CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH VADQYIARIVGDVKLARPLKIVVDAGNGVAGPLATRLFKALGCELVERFTDIDGTFPNHH HHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDPAHPENLQDVIQALKDTDAELGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSR CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHCC NPGAQIIYDVKCTRHLAQWVKSKGGEPLMWKTGHSLVKAKLRETGAPLAGEMSGHVFFKD CCCCCEEEEHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCEEEEEC RWYGFDDGLYTGARLLEILAKTADPSALLNSLPDAMSTPELQLWLDEGENFRLIEQLQKE CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHH AKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVMRFEAETQEGLKRIQEDFRRVLTA HCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH AKPDVKLPF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8157643; 8188595 [H]