| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688844
Identifier: 116688844
GI number: 116688844
Start: 920871
End: 922175
Strand: Direct
Name: 116688844
Synonym: Bcen2424_0821
Alternate gene names: NA
Gene position: 920871-922175 (Clockwise)
Preceding gene: 116688843
Following gene: 116688851
Centisome position: 26.43
GC content: 67.51
Gene sequence:
>1305_bases ATGAGCGACACCCAAGACTGGCGCGCGACGCTCGACCCGGCTCGCAAGAGCTGGATCGACACGGCGAACGATCCCGCGTG CGATTTCCCGATCCAGAACCTGCCGTTCGGGATCTTCAGCGATGCGAAGCAGGGCGTGCGCCGTGCCGGCGTTGCACTGG GCGACCAGATCGTCGATCTCGCGGCACTCGCGCGTGCGGGCCTCGTGACGCTGCCGGCCGGCGCCGACGTGTTCGCCGCG CCGACGCTCAACGCGTTCATCGCGCTCGGCCGCGATGCATGGCGCAGCGTACGCTCGCAACTGTCGGCGCTGTTCTCGCG CGACAACGCGACGCTGCGTGACGATGCGGCGCTGCGCGCGCAGGTACTCGTCGCGCAGCGCGACGCGACGCTGCATCTGC CGGTCGAGATTCCCGGCTACACCGATTTCTATTCGTCGAAGGAGCACGCGACCAACGTCGGCTCGATGTTCCGTGATCCG AAGAATGCGCTGCTGCCGAACTGGTCGGAGATGCCGATCGGCTACAACGGCCGCGCGTCGTCGGTGGTCGTGAGCGGCAC GCCGGTGCGGCGCCCGAACGGGCAACTGAAGCTGCCCGACCAGGAGCGTCCGGTGTTCGGTGCGTGCCGCAAGCTCGACA TCGAACTGGAGACGGGCTTCATCGTCGGCAAGGGCAACGCACTCGGCGAGCCGATCGCGTGCGAGGACGCGGAAGCGCAT ATCTTCGGGATGGTGCTGCTGAACGACTGGAGCGCGCGCGACATCCAGCAGTGGGAATACGTGCCGCTCGGGCCGTTCAA CTCGAAGGGCTTCGCGACGACGATCTCGCCGTGGATCGTCACGCTCGACGCGCTCGAACCGTTCCGCGTCGCGCAGCCGG AGCAGTCGCCGCAGCCGCTCGCGTATCTGCGGCATGCGGGCAAGCATGCGTTCGATATCGCGCTGGAAGTGACGCTGCGC GCAGAGGGTGCGGCCGAGGCCACGTCGATCTGCCGCACCAACTTCAAGCACATGTACTGGACGATGGCGCAGCAGCTCGC GCATCACACGGTGGCCGGCTGCAACACGCGCGTGGGCGACCTGATGGGTTCGGGCACGATCAGCGGGCCGACCAAGGATT CGTTCGGCAGCCTGCTCGAACTGACGTGGAACGGCAAGGAGCCGGTCGCGCTGAACGGCGGCGGCAGCCGCACGTTCATC GAGGACGGCGACGAGCTGACGCTCGCGGGCTGGTGCCAGGGCGAGGGGTATCGCGTCGGCTTCGGTACGTGTGCAGGCAA GATTTTGCCGGCACGCAGCGTGTGA
Upstream 100 bases:
>100_bases TGATTCGGCCGACGCGCTACGCGCTCGACACCGCGCAGCTGCAGGCCGACTACTTCGAATGCTGGCAAGGCATCAAGAAA CACTTCAATCCGGAGCAACG
Downstream 100 bases:
>100_bases CGGATCGCAGCGCGAAATGTGACGTATAGGTCACGCGTAGAGGACGGCCCGCATTGCGCAGGCCGTTGTCGTTTACCGGA GGAAGAGCGCGAGCGGGCCG
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSDTQDWRATLDPARKSWIDTANDPACDFPIQNLPFGIFSDAKQGVRRAGVALGDQIVDLAALARAGLVTLPAGADVFAA PTLNAFIALGRDAWRSVRSQLSALFSRDNATLRDDAALRAQVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDP KNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAH IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLR AEGAAEATSICRTNFKHMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFI EDGDELTLAGWCQGEGYRVGFGTCAGKILPARSV
Sequences:
>Translated_434_residues MSDTQDWRATLDPARKSWIDTANDPACDFPIQNLPFGIFSDAKQGVRRAGVALGDQIVDLAALARAGLVTLPAGADVFAA PTLNAFIALGRDAWRSVRSQLSALFSRDNATLRDDAALRAQVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDP KNALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAH IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLR AEGAAEATSICRTNFKHMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFI EDGDELTLAGWCQGEGYRVGFGTCAGKILPARSV >Mature_433_residues SDTQDWRATLDPARKSWIDTANDPACDFPIQNLPFGIFSDAKQGVRRAGVALGDQIVDLAALARAGLVTLPAGADVFAAP TLNAFIALGRDAWRSVRSQLSALFSRDNATLRDDAALRAQVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDPK NALLPNWSEMPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAHI FGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLRA EGAAEATSICRTNFKHMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFIE DGDELTLAGWCQGEGYRVGFGTCAGKILPARSV
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=418, Percent_Identity=58.133971291866, Blast_Score=515, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17568863, Length=418, Percent_Identity=55.5023923444976, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI24657182, Length=409, Percent_Identity=52.5672371638142, Blast_Score=431, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 46924; Mature: 46793
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTQDWRATLDPARKSWIDTANDPACDFPIQNLPFGIFSDAKQGVRRAGVALGDQIVDL CCCCCCHHHHCCHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AALARAGLVTLPAGADVFAAPTLNAFIALGRDAWRSVRSQLSALFSRDNATLRDDAALRA HHHHHCCEEEECCCCCEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHE QVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRAS EEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC SVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAH EEEEECCCCCCCCCCEECCCCCCCHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCCE IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPL EEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHH AYLRHAGKHAFDIALEVTLRAEGAAEATSICRTNFKHMYWTMAQQLAHHTVAGCNTRVGD HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFIEDGDELTLAGWCQGEGYRVG HCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCCEEEEEEEECCCCEEEE FGTCAGKILPARSV HHHCCCCEECCCCC >Mature Secondary Structure SDTQDWRATLDPARKSWIDTANDPACDFPIQNLPFGIFSDAKQGVRRAGVALGDQIVDL CCCCCHHHHCCHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH AALARAGLVTLPAGADVFAAPTLNAFIALGRDAWRSVRSQLSALFSRDNATLRDDAALRA HHHHHCCEEEECCCCCEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHE QVLVAQRDATLHLPVEIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWSEMPIGYNGRAS EEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC SVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGKGNALGEPIACEDAEAH EEEEECCCCCCCCCCEECCCCCCCHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCCCCE IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPL EEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHH AYLRHAGKHAFDIALEVTLRAEGAAEATSICRTNFKHMYWTMAQQLAHHTVAGCNTRVGD HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LMGSGTISGPTKDSFGSLLELTWNGKEPVALNGGGSRTFIEDGDELTLAGWCQGEGYRVG HCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCCEEEEEEEECCCCEEEE FGTCAGKILPARSV HHHCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA