Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is rkpI [H]

Identifier: 116688804

GI number: 116688804

Start: 879657

End: 881195

Strand: Direct

Name: rkpI [H]

Synonym: Bcen2424_0781

Alternate gene names: 116688804

Gene position: 879657-881195 (Clockwise)

Preceding gene: 116688803

Following gene: 116688805

Centisome position: 25.25

GC content: 56.92

Gene sequence:

>1539_bases
TTGAGTGGGGAACTTGCGACGCATGGTTTCGCAATTGCAGCGGCGCTGGTGTTGTCCTTTGTCGCGGATTTGGTGGCCCG
CCCGCGAGGCGCGTGGCGTCGTCCGCCGGTTGCCATCTTGTTGCACGTATTCGCAGTTATATGCGTGTTTTGCGCGGCTT
TCTCGCTAACTATTCGGCCGCTCTTTTCTGCGTTTGTTGCCGTTGCACTTGTCGGTCTTCTAGCTGCCGTGAGCAATGCG
AAGTATGAGTCGTTGCTCGAGCCTTTCGTATTCACCGACCTCAGTCTGTTCAGCCAGCTTTTCTCCCATCCACGTCTCTA
TCTGCCTTTCCTGAGTGCAGGCAAGGTGGCTGCGATTGCGGCCTGTGTGATGTTGCTAACGAGTGGCTACATGCTCGAGT
CCCCGTCGTTTCCGAGCTTTCGCGGTGTTGCCATCGTGGCTGCGGCGATGTGTTTTCTGGGCGCGCGCTGGTTTGCCGCC
CATCTTGCGCTGTCGCTTGTCGCGTCCGACGATCAGAATCGGTTCGGCTTTTTCTCGGTATTCGTCGCCTACTTGTTGAA
TGGCCTGCGCGTTTCCACTATCCGAGAATTCGAGCGGCAGGCGGGGCTAGGGCCATTTGCCTCCGGTGCTCCGGCGACAC
GCCCGGATGTCGTTGTGATCCAGAGCGAGTCCTTTTTTGACATTCGCAGAGCAGGACCGGCAATCAATCGCGATATTCTT
TCTCGATTCGATCAGGCCTGCCGAGAGGCGCGTGTTTACGGTGAGCTGACCGTGCCAGCCTGGGGGGCGAACACAATGAG
GACGGAGTTCGCGTTATTAACAGGATTGGGGGCGGATAGATTGGGTTATGCGCGTTTTTATCCGTATGCATTCGTGCGCC
GGGCATGCGCATCGATTGCCAGCTGGTTCCGGAGAGGTGGCTACGCGACGGTCGCAATTCACCCGTACTATGCTGATTTT
TTCGGCCGCGACCGCGTGTTTCCGTTGATGGGGTTCGAAAGGCTTGTCGGTATCGAGGCCTTTGCCGACGCGCCAAGGTT
TGGGCCCTATGTGTCCGATTCTGCGGTCGCGGACGCGATTATTGAGACCTTGGACGAGCCGACTGACGGGCCGAAGTTCA
TATTCGCGATGACGATGGAGAATCACGGCCCCTTCCATCTCGAAGCTTTGCCGGCGGGGGAAATGCATTTCCAGCACGCG
CTTGGTACAGATCCGGTTTGGCGCGATCTTACCGTTTACCTGCGGCACATTGAAAATGCAGACGCAATGATTGGCCGCCT
GCTCGACCATTTGCGCACCAGCGATCGTGAAACAGTCGTTTGTTTTTACGGCGATCACGTTCCCGCTCTGCCTCACGTAT
TCGATAAGCTGGGCGTTTCCCCGCAAACCAGCGACTACTTCATTTGGCGAAATTACGGCACGGACACGCCCGAATGCCGG
AATTTGGCAGCCGAAGAGCTTGGGTCGGTACTTTTGCATGTGGTACAAGATGACGGACATCGCGCGGAACAACCGCACGC
ATCCGAGAAAGCGACATAA

Upstream 100 bases:

>100_bases
ATGCTTGCGGTGGGCATGCGACTACTTAACGTTTTACCGGTGCGGATCGCAGACGCCATCCTGTCACGCTTGTCCTACAT
TCCACGAGAGGGGCAATAGC

Downstream 100 bases:

>100_bases
AAGATGAACAGTAAGATTGCAATAATTGGGGTGGCTTGTCGGTTTCCCGGGAGCGCGAACAATCTTGGCGACTTCTGGCA
ACTGCTGCGCGACGAACGCG

Product: sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSGELATHGFAIAAALVLSFVADLVARPRGAWRRPPVAILLHVFAVICVFCAAFSLTIRPLFSAFVAVALVGLLAAVSNA
KYESLLEPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAACVMLLTSGYMLESPSFPSFRGVAIVAAAMCFLGARWFAA
HLALSLVASDDQNRFGFFSVFVAYLLNGLRVSTIREFERQAGLGPFASGAPATRPDVVVIQSESFFDIRRAGPAINRDIL
SRFDQACREARVYGELTVPAWGANTMRTEFALLTGLGADRLGYARFYPYAFVRRACASIASWFRRGGYATVAIHPYYADF
FGRDRVFPLMGFERLVGIEAFADAPRFGPYVSDSAVADAIIETLDEPTDGPKFIFAMTMENHGPFHLEALPAGEMHFQHA
LGTDPVWRDLTVYLRHIENADAMIGRLLDHLRTSDRETVVCFYGDHVPALPHVFDKLGVSPQTSDYFIWRNYGTDTPECR
NLAAEELGSVLLHVVQDDGHRAEQPHASEKAT

Sequences:

>Translated_512_residues
MSGELATHGFAIAAALVLSFVADLVARPRGAWRRPPVAILLHVFAVICVFCAAFSLTIRPLFSAFVAVALVGLLAAVSNA
KYESLLEPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAACVMLLTSGYMLESPSFPSFRGVAIVAAAMCFLGARWFAA
HLALSLVASDDQNRFGFFSVFVAYLLNGLRVSTIREFERQAGLGPFASGAPATRPDVVVIQSESFFDIRRAGPAINRDIL
SRFDQACREARVYGELTVPAWGANTMRTEFALLTGLGADRLGYARFYPYAFVRRACASIASWFRRGGYATVAIHPYYADF
FGRDRVFPLMGFERLVGIEAFADAPRFGPYVSDSAVADAIIETLDEPTDGPKFIFAMTMENHGPFHLEALPAGEMHFQHA
LGTDPVWRDLTVYLRHIENADAMIGRLLDHLRTSDRETVVCFYGDHVPALPHVFDKLGVSPQTSDYFIWRNYGTDTPECR
NLAAEELGSVLLHVVQDDGHRAEQPHASEKAT
>Mature_511_residues
SGELATHGFAIAAALVLSFVADLVARPRGAWRRPPVAILLHVFAVICVFCAAFSLTIRPLFSAFVAVALVGLLAAVSNAK
YESLLEPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIAACVMLLTSGYMLESPSFPSFRGVAIVAAAMCFLGARWFAAH
LALSLVASDDQNRFGFFSVFVAYLLNGLRVSTIREFERQAGLGPFASGAPATRPDVVVIQSESFFDIRRAGPAINRDILS
RFDQACREARVYGELTVPAWGANTMRTEFALLTGLGADRLGYARFYPYAFVRRACASIASWFRRGGYATVAIHPYYADFF
GRDRVFPLMGFERLVGIEAFADAPRFGPYVSDSAVADAIIETLDEPTDGPKFIFAMTMENHGPFHLEALPAGEMHFQHAL
GTDPVWRDLTVYLRHIENADAMIGRLLDHLRTSDRETVVCFYGDHVPALPHVFDKLGVSPQTSDYFIWRNYGTDTPECRN
LAAEELGSVLLHVVQDDGHRAEQPHASEKAT

Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 56330; Mature: 56199

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGELATHGFAIAAALVLSFVADLVARPRGAWRRPPVAILLHVFAVICVFCAAFSLTIRP
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFSAFVAVALVGLLAAVSNAKYESLLEPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
ACVMLLTSGYMLESPSFPSFRGVAIVAAAMCFLGARWFAAHLALSLVASDDQNRFGFFSV
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FVAYLLNGLRVSTIREFERQAGLGPFASGAPATRPDVVVIQSESFFDIRRAGPAINRDIL
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCHHHH
SRFDQACREARVYGELTVPAWGANTMRTEFALLTGLGADRLGYARFYPYAFVRRACASIA
HHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SWFRRGGYATVAIHPYYADFFGRDRVFPLMGFERLVGIEAFADAPRFGPYVSDSAVADAI
HHHHCCCEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IETLDEPTDGPKFIFAMTMENHGPFHLEALPAGEMHFQHALGTDPVWRDLTVYLRHIENA
HHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHCCH
DAMIGRLLDHLRTSDRETVVCFYGDHVPALPHVFDKLGVSPQTSDYFIWRNYGTDTPECR
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
NLAAEELGSVLLHVVQDDGHRAEQPHASEKAT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGELATHGFAIAAALVLSFVADLVARPRGAWRRPPVAILLHVFAVICVFCAAFSLTIRP
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LFSAFVAVALVGLLAAVSNAKYESLLEPFVFTDLSLFSQLFSHPRLYLPFLSAGKVAAIA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH
ACVMLLTSGYMLESPSFPSFRGVAIVAAAMCFLGARWFAAHLALSLVASDDQNRFGFFSV
HHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FVAYLLNGLRVSTIREFERQAGLGPFASGAPATRPDVVVIQSESFFDIRRAGPAINRDIL
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCHHHH
SRFDQACREARVYGELTVPAWGANTMRTEFALLTGLGADRLGYARFYPYAFVRRACASIA
HHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SWFRRGGYATVAIHPYYADFFGRDRVFPLMGFERLVGIEAFADAPRFGPYVSDSAVADAI
HHHHCCCEEEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
IETLDEPTDGPKFIFAMTMENHGPFHLEALPAGEMHFQHALGTDPVWRDLTVYLRHIENA
HHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHCCH
DAMIGRLLDHLRTSDRETVVCFYGDHVPALPHVFDKLGVSPQTSDYFIWRNYGTDTPECR
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
NLAAEELGSVLLHVVQDDGHRAEQPHASEKAT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9079896; 11481430 [H]