Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688750

Identifier: 116688750

GI number: 116688750

Start: 812040

End: 812186

Strand: Direct

Name: 116688750

Synonym: Bcen2424_0727

Alternate gene names: NA

Gene position: 812040-812186 (Clockwise)

Preceding gene: 116688749

Following gene: 116688751

Centisome position: 23.31

GC content: 70.07

Gene sequence:

>147_bases
ATGACGCAAATGATGCTCAACGTGCGTGCCGCAGCGTCGCCCATTCTGCGATCGCCGGGCGAGCTGGCGCGCTACGTCGT
CGGCTTCGCGATCGTCGGCGGCGGGGCGGTGGAGCTGGTCTCGCAGGCGCTGCACGCGCTCGCGTAG

Upstream 100 bases:

>100_bases
CTGGCCGCATCCTGATGCGGTGATGCAGTAATGTGAAACGGCCGGTCCAGCGACTGGCCGTTTCTTCTCTGAACGATGTC
TTGTCAAAGGAGTGACGACC

Downstream 100 bases:

>100_bases
TGCGACGATGGATTCGCGACGCTAGACTGGCGAGTCGCGAACGGATGTCGCGCGACGCGGCATGCGGATTGCTCGACGCA
TTTTCGCCGGTTCAACATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 47

Protein sequence:

>48_residues
MTQMMLNVRAAASPILRSPGELARYVVGFAIVGGGAVELVSQALHALA

Sequences:

>Translated_48_residues
MTQMMLNVRAAASPILRSPGELARYVVGFAIVGGGAVELVSQALHALA
>Mature_47_residues
TQMMLNVRAAASPILRSPGELARYVVGFAIVGGGAVELVSQALHALA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4938; Mature: 4807

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMMLNVRAAASPILRSPGELARYVVGFAIVGGGAVELVSQALHALA
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TQMMLNVRAAASPILRSPGELARYVVGFAIVGGGAVELVSQALHALA
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA