| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yceI [C]
Identifier: 116688739
GI number: 116688739
Start: 795610
End: 796191
Strand: Direct
Name: yceI [C]
Synonym: Bcen2424_0716
Alternate gene names: 116688739
Gene position: 795610-796191 (Clockwise)
Preceding gene: 116688738
Following gene: 116688740
Centisome position: 22.84
GC content: 63.23
Gene sequence:
>582_bases TTGAAAAAGCATCTGATCATCGCTGCCGGCGCGCTGGCCGCTTCCCTGTCGTTCTCGGCCTTCGCCGAAAGCGCAACCTA CCAGTTCGATCCGAGCCACACGTACCCGAGCTTCGAGGCCGACCACTTCGGCGGCCTGTCGGTCTGGCGCGGCAAGTTCG ACAAGTCGAGCGGCACCGTGACGCTCGACCGCGCGGCGAAGACCGGCACGGTCGACGTGACGACCGACATCGCGTCGATC CACACGGGCAGCGCGAAGCTCGACGAGCACCTGCAGACGGCCGAGTTCTTCGATGCGGCGAAGTTCCCGCAGGCGAACTA CAAGGGCACGATCAAGTTCGACGGCGACAAGCCGGTGTCGGTGGTCGGCAACCTGACGCTGCACGGCGTCACGAAGCCGC TCACGCTGAAGATCGATTCGTTCAAGTGCATGCCGCACCCGATGCTCAAGCGTGAAGTGTGCGGCGTCGACGCGGTCGGC GAATTCAGCCGCGACGATTTCGGCCTCGACTACGGCAAGCAGTACGGCTTCAAGATGAAGACGAAGCTGCTGATCACGGC CGAAGCGGTCAAGCAGCAGTAA
Upstream 100 bases:
>100_bases TGCAGATCAAGTTCCATCTCGTCGCCACGAAGTAAGCGGCAGGTTGCCGCCTCAACTGAATGCCGCGCGAGGGCGCGGCG CCGTTTCCAGGAGAAAAAGT
Downstream 100 bases:
>100_bases GACTCCCCGGCAGGGCCGGCCATCGTGCCGGCCCCCGCGGAAACCGCCGCGCTCCCCTCACCGGGGGCGCGGCGGTTTTT TTTGCGCGCCTATAATCGCC
Product: YceI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKKHLIIAAGALAASLSFSAFAESATYQFDPSHTYPSFEADHFGGLSVWRGKFDKSSGTVTLDRAAKTGTVDVTTDIASI HTGSAKLDEHLQTAEFFDAAKFPQANYKGTIKFDGDKPVSVVGNLTLHGVTKPLTLKIDSFKCMPHPMLKREVCGVDAVG EFSRDDFGLDYGKQYGFKMKTKLLITAEAVKQQ
Sequences:
>Translated_193_residues MKKHLIIAAGALAASLSFSAFAESATYQFDPSHTYPSFEADHFGGLSVWRGKFDKSSGTVTLDRAAKTGTVDVTTDIASI HTGSAKLDEHLQTAEFFDAAKFPQANYKGTIKFDGDKPVSVVGNLTLHGVTKPLTLKIDSFKCMPHPMLKREVCGVDAVG EFSRDDFGLDYGKQYGFKMKTKLLITAEAVKQQ >Mature_193_residues MKKHLIIAAGALAASLSFSAFAESATYQFDPSHTYPSFEADHFGGLSVWRGKFDKSSGTVTLDRAAKTGTVDVTTDIASI HTGSAKLDEHLQTAEFFDAAKFPQANYKGTIKFDGDKPVSVVGNLTLHGVTKPLTLKIDSFKCMPHPMLKREVCGVDAVG EFSRDDFGLDYGKQYGFKMKTKLLITAEAVKQQ
Specific function: Unknown
COG id: COG2353
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787295, Length=200, Percent_Identity=35.5, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007372 [H]
Pfam domain/function: PF04264 YceI [H]
EC number: NA
Molecular weight: Translated: 20989; Mature: 20989
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHLIIAAGALAASLSFSAFAESATYQFDPSHTYPSFEADHFGGLSVWRGKFDKSSGTV CCCEEEEEECHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCE TLDRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDAAKFPQANYKGTIKFDGDKPVS EEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEE VVGNLTLHGVTKPLTLKIDSFKCMPHPMLKREVCGVDAVGEFSRDDFGLDYGKQYGFKMK EEECEEEECCCCCEEEEECCEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE TKLLITAEAVKQQ EEEEEEEHHHHCC >Mature Secondary Structure MKKHLIIAAGALAASLSFSAFAESATYQFDPSHTYPSFEADHFGGLSVWRGKFDKSSGTV CCCEEEEEECHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCE TLDRAAKTGTVDVTTDIASIHTGSAKLDEHLQTAEFFDAAKFPQANYKGTIKFDGDKPVS EEECCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEE VVGNLTLHGVTKPLTLKIDSFKCMPHPMLKREVCGVDAVGEFSRDDFGLDYGKQYGFKMK EEECEEEECCCCCEEEEECCEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEE TKLLITAEAVKQQ EEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA