| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yqiA [H]
Identifier: 116688634
GI number: 116688634
Start: 681787
End: 682356
Strand: Direct
Name: yqiA [H]
Synonym: Bcen2424_0611
Alternate gene names: 116688634
Gene position: 681787-682356 (Clockwise)
Preceding gene: 116688633
Following gene: 116688635
Centisome position: 19.57
GC content: 66.14
Gene sequence:
>570_bases GTGATCCTGTATCTGCACGGCTTCCGGTCGTCGCCGGAATCGCAGAAGTCGCGACTGCTCGCCGCGCGCATGGCCGAACT CGGCCGCACCGGCGAGTGGCGGTGCCCGTCGCTGTCGGTATCGCCGCTCGAGGCGATCGCCGTCGCGGAAGCCGAGGTCG CGGGCGCACGCGACGTCACCGTGATCGGCAGCTCGCTCGGCGGTTATTACGCGACGTGGCTCGCCGAAAAGCATGGCTGG AAGGCCGTGCTGCTGAATCCGGCCATCGTGCCGCAGCGCGATCTCGAACAGTATCTGGGCGAACAGTCGCTGTGGCACGG CGGCGGCACGATTGTCGTCGAGCGCCGTCACCTGCACGAACTCGACGCGCTGCGCGTGCCGGCGATCACGCGCGCCGACC GCTACTATCTGTTCGCGGCGACCGGCGACGAAGTGCTCGATTACCGCGAGATGCTCGCCCACTACCCGCGCGCGAAAACT CGCGTGATCGACGGCAGCGATCACGGGATCAGCGAATTTGCCGACTATGTCGACGACGTTCTCGCGTTTTGCGACGGAAA GACGTCTTAA
Upstream 100 bases:
>100_bases TGGTCGAGGCCGCGCGTCCGGGCGATCACGTGCTCGTGATGAGCAACGGCGGCTTCGGCGGCGTGCACCAGAAGCTGCTC GATGCGCTCGGGAGCCGCCC
Downstream 100 bases:
>100_bases ACCGGCCGCGTGCCGATCGAATTCCCATCATCATGCGGCGCCGCTGACGCGGCGCCCGGCAGTCTGAACGAGAGTACTGA GTGAACGTTTTCTTCGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MILYLHGFRSSPESQKSRLLAARMAELGRTGEWRCPSLSVSPLEAIAVAEAEVAGARDVTVIGSSLGGYYATWLAEKHGW KAVLLNPAIVPQRDLEQYLGEQSLWHGGGTIVVERRHLHELDALRVPAITRADRYYLFAATGDEVLDYREMLAHYPRAKT RVIDGSDHGISEFADYVDDVLAFCDGKTS
Sequences:
>Translated_189_residues MILYLHGFRSSPESQKSRLLAARMAELGRTGEWRCPSLSVSPLEAIAVAEAEVAGARDVTVIGSSLGGYYATWLAEKHGW KAVLLNPAIVPQRDLEQYLGEQSLWHGGGTIVVERRHLHELDALRVPAITRADRYYLFAATGDEVLDYREMLAHYPRAKT RVIDGSDHGISEFADYVDDVLAFCDGKTS >Mature_189_residues MILYLHGFRSSPESQKSRLLAARMAELGRTGEWRCPSLSVSPLEAIAVAEAEVAGARDVTVIGSSLGGYYATWLAEKHGW KAVLLNPAIVPQRDLEQYLGEQSLWHGGGTIVVERRHLHELDALRVPAITRADRYYLFAATGDEVLDYREMLAHYPRAKT RVIDGSDHGISEFADYVDDVLAFCDGKTS
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=184, Percent_Identity=39.1304347826087, Blast_Score=135, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 20946; Mature: 20946
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYLHGFRSSPESQKSRLLAARMAELGRTGEWRCPSLSVSPLEAIAVAEAEVAGARDVT CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE VIGSSLGGYYATWLAEKHGWKAVLLNPAIVPQRDLEQYLGEQSLWHGGGTIVVERRHLHE EECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCEEEEEHHHHHH LDALRVPAITRADRYYLFAATGDEVLDYREMLAHYPRAKTRVIDGSDHGISEFADYVDDV HHHHCCCCEECCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH LAFCDGKTS HHHCCCCCC >Mature Secondary Structure MILYLHGFRSSPESQKSRLLAARMAELGRTGEWRCPSLSVSPLEAIAVAEAEVAGARDVT CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEE VIGSSLGGYYATWLAEKHGWKAVLLNPAIVPQRDLEQYLGEQSLWHGGGTIVVERRHLHE EECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEECCCCEEEEEHHHHHH LDALRVPAITRADRYYLFAATGDEVLDYREMLAHYPRAKTRVIDGSDHGISEFADYVDDV HHHHCCCCEECCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH LAFCDGKTS HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]