Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688595

Identifier: 116688595

GI number: 116688595

Start: 644370

End: 645239

Strand: Direct

Name: 116688595

Synonym: Bcen2424_0571

Alternate gene names: NA

Gene position: 644370-645239 (Clockwise)

Preceding gene: 116688594

Following gene: 116688596

Centisome position: 18.5

GC content: 65.06

Gene sequence:

>870_bases
ATGGACAAGCTTGAACAGTTTCTGACGCGCGCGGAAGCGCTGCTCGGCCGTCTCGAAGGGATGCTGCCGCCCGCACCGGC
GGCCATCGACTGGAACGCGGCGCACGCGTTCCGCTGGCGCAAGCGCCAGGGGCGCGGTTACCTGCAGCCGGTACCGGCCG
TGTCGTCGATCACGCTCGGCGACTTGCACAACATCGATCGCCAGAAAGCACTGATCGACCAGAACACGCGGCAGTTCGTA
CAGCGCAAGCCGGCCAACAACGTGCTGCTGACGGGCGCGCGCGGTACCGGCAAGTCGTCGCTGATCAAGGCGTGCCTGAA
TGCGTACGCGAACGACGGACTGCGTCTGATCGAAGTCGACAAGGACGACCTGCACGATCTCGGCGACATCGTCGACCTGA
TCTCGCAGCGTCCGGAGCGGTTCATCGTGTTTTGCGACGACCTGTCGTTCGAGGACGGCGAATCGGGCTACAAGGCGCTG
AAGGTCGCGCTCGACGGGTCGATCGCCGCGCAGTCGGACAACGTGCTGATCTACGCGACGTCGAACCGCCGCCATCTGCT
GCCCGAGTACATGAGCGACAACGAGTCGTACAAGCATCTGCCGGACGGCGAGATTCACCCCGGCGAAGTCGTCGAGGAGA
AGATCTCGCTGTCGGAGCGCTTCGGGCTGTGGGTCAGCTTCTATCCGTTCAAGCAGGACGACTACCTCGACATCGTCGCG
CACTGGCTGCGTCACTTCGGCTGCCCGGAGACGGAGATCGAGACGGCACGCGGCGATGCGCTCGTATGGGCGCTCGAGCG
CGGTTCGCGCTCGGGCCGCGTCGCGTGGCAGTTCGCGCGTGACTGGTCGGGTCGCAAGGAGCAGGCATGA

Upstream 100 bases:

>100_bases
CGTGGCGACGCGCAGGCCACCGTCTGGACGTGCGACCTGTCGCACGATTACGTGAGCATCAACGCGGATTACCGCTCCTG
ATCGGGAGCGCTCGAACGAC

Downstream 100 bases:

>100_bases
GCGCGGATCTGGCACAGGGCGCCGTGCGGGCGCCGGACGGCCGCAAGGTGACGGAAGTCGCGGTCGGCGTGATGGTGCAG
CCGGACGGGCGCTATCTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; AAA ATPase Superfamily; Intermediate Filament Protein; AAA+ Superfamily ATPase

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV
QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL
KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA
HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA

Sequences:

>Translated_289_residues
MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV
QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL
KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA
HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
>Mature_289_residues
MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLGDLHNIDRQKALIDQNTRQFV
QRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVDKDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKAL
KVALDGSIAAQSDNVLIYATSNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA
HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA

Specific function: Unknown

COG id: COG2607

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32663; Mature: 32663

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLG
CCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHH
DLHNIDRQKALIDQNTRQFVQRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVD
HHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC
KDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKALKVALDGSIAAQSDNVLIYAT
CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE
SNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA
CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
HHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MDKLEQFLTRAEALLGRLEGMLPPAPAAIDWNAAHAFRWRKRQGRGYLQPVPAVSSITLG
CCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEHH
DLHNIDRQKALIDQNTRQFVQRKPANNVLLTGARGTGKSSLIKACLNAYANDGLRLIEVD
HHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEC
KDDLHDLGDIVDLISQRPERFIVFCDDLSFEDGESGYKALKVALDGSIAAQSDNVLIYAT
CHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCEEECCCCEEEEEE
SNRRHLLPEYMSDNESYKHLPDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLDIVA
CCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH
HWLRHFGCPETEIETARGDALVWALERGSRSGRVAWQFARDWSGRKEQA
HHHHHCCCCCCHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA