Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is ygiF [H]

Identifier: 116688554

GI number: 116688554

Start: 590771

End: 591397

Strand: Reverse

Name: ygiF [H]

Synonym: Bcen2424_0530

Alternate gene names: 116688554

Gene position: 591397-590771 (Counterclockwise)

Preceding gene: 116688555

Following gene: 116688553

Centisome position: 16.98

GC content: 69.86

Gene sequence:

>627_bases
ATGGCGATCGAACAGGAAATCAAGCTCGCGCTGCCGGCCGGCCAGGCCGACGCCGCGCGCCGCTTCTTCGAGACGCTGAC
CGGCGAACCCGGCCGTGCCATCACGCTCGCGAACGTCTATTACGACACGCCCGATCTCGCGCTGGCGCGCTCGAAGAGCG
CGGTGCGCGTGCGCCGCACGCCGGACGGCTGGCTGCAGACGTTCAAGACGGTCGGCAGCGCGGAAGGCGGCCTGCATAGC
CGCCACGAATGGGAGCTGCCGGTCGCCGGCGACGCGCTCGAAATCGACGCGCTCGTCGCGGCCTGCGACGTGCCGGAAGC
CGCCGCCGCGCTCAATGACGCGGCCGGCGCGCTGCACGCGCTGTTCCGCACGGATTTTTCGCGTACGCTGTGGCGCATCG
CAATCGGCGGCGCAACCGTCGAGGCCGCGGTGGACCTCGGCGAGATCGTCGTCCAGGCGGAACACGAAACGCGCCGCGAA
CCGATCAGCGAAATCGAACTCGAACTGATCGACGGCCCGGAAACGGCGCTCGCGACGCTCGCCGCCGAACTGCAGCAGGC
ACTGCCGGGCCTCGTTCCCGAAAACATCAGCAAGGCGCAGCGCGGCTACCGGCTGCGCGCGCAATAA

Upstream 100 bases:

>100_bases
TCGACACGATGCGCGCGGCGAACGTGAACACGTTCCTCGTCGGCGAGGCGTTCATGCGCGCCGAGCAGCCGGGCGAGGAA
CTCGCACGGATGTTCTTCTG

Downstream 100 bases:

>100_bases
ACTCGCATCACGCATGGCAACCCGCAAGACTTCCCGCGCGCCGCAACAGGCGTCGCTGTTCGACGATCCCGTGCCGGAAA
CGGCACCGGCCGATATTCCG

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAIEQEIKLALPAGQADAARRFFETLTGEPGRAITLANVYYDTPDLALARSKSAVRVRRTPDGWLQTFKTVGSAEGGLHS
RHEWELPVAGDALEIDALVAACDVPEAAAALNDAAGALHALFRTDFSRTLWRIAIGGATVEAAVDLGEIVVQAEHETRRE
PISEIELELIDGPETALATLAAELQQALPGLVPENISKAQRGYRLRAQ

Sequences:

>Translated_208_residues
MAIEQEIKLALPAGQADAARRFFETLTGEPGRAITLANVYYDTPDLALARSKSAVRVRRTPDGWLQTFKTVGSAEGGLHS
RHEWELPVAGDALEIDALVAACDVPEAAAALNDAAGALHALFRTDFSRTLWRIAIGGATVEAAVDLGEIVVQAEHETRRE
PISEIELELIDGPETALATLAAELQQALPGLVPENISKAQRGYRLRAQ
>Mature_207_residues
AIEQEIKLALPAGQADAARRFFETLTGEPGRAITLANVYYDTPDLALARSKSAVRVRRTPDGWLQTFKTVGSAEGGLHSR
HEWELPVAGDALEIDALVAACDVPEAAAALNDAAGALHALFRTDFSRTLWRIAIGGATVEAAVDLGEIVVQAEHETRREP
ISEIELELIDGPETALATLAAELQQALPGLVPENISKAQRGYRLRAQ

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=205, Percent_Identity=34.6341463414634, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 22343; Mature: 22212

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIEQEIKLALPAGQADAARRFFETLTGEPGRAITLANVYYDTPDLALARSKSAVRVRRT
CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHCCCCCEEEECC
PDGWLQTFKTVGSAEGGLHSRHEWELPVAGDALEIDALVAACDVPEAAAALNDAAGALHA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LFRTDFSRTLWRIAIGGATVEAAVDLGEIVVQAEHETRREPISEIELELIDGPETALATL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCHHHHHCCHHHEEEEEECCCHHHHHHH
AAELQQALPGLVPENISKAQRGYRLRAQ
HHHHHHHCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
AIEQEIKLALPAGQADAARRFFETLTGEPGRAITLANVYYDTPDLALARSKSAVRVRRT
CCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHCCCCCEEEECC
PDGWLQTFKTVGSAEGGLHSRHEWELPVAGDALEIDALVAACDVPEAAAALNDAAGALHA
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LFRTDFSRTLWRIAIGGATVEAAVDLGEIVVQAEHETRREPISEIELELIDGPETALATL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCHHHHHCCHHHEEEEEECCCHHHHHHH
AAELQQALPGLVPENISKAQRGYRLRAQ
HHHHHHHCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]