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The map label for this gene is sspB [H]

Identifier: 116688469

GI number: 116688469

Start: 490507

End: 491028

Strand: Direct

Name: sspB [H]

Synonym: Bcen2424_0445

Alternate gene names: 116688469

Gene position: 490507-491028 (Clockwise)

Preceding gene: 116688468

Following gene: 116688470

Centisome position: 14.08

GC content: 64.37

Gene sequence:

>522_bases
ATGCAAGAGATTTCAACGAAGCCTTATCTGCTGCGCGCGTTGTACGAGTGGTGCACCGATAACGGTTACACGCCGCATAT
CGCGGTGAGGGTCGACAACTCGACGCGCGTGCCGCGTCAGTTCGTGCGTGACGGCGAGATCGTGCTCAACATCAGCTTCG
AGGCGACGAGCCAGTTGCAGATGGGCAACGAGTGGATCGAGTTCACGGCCCGGTTCTCCGGGAAGGCGCACAAGATCGAG
ATTCCGGTGGCCAACGTGCTCGCGATCTATGCGCGCGAGAACGGGCAGGGCATGGCATTCCAGGTCGATGCGGTCGCGGG
CGAAGGCGAGGATTCGGGCGCGTTCGACGATGACGCCGCGCCGGCCGACGACGCGCAGCGCGACGAGTCCGTATCGCCGT
TGGCGCCGGTCGCCGACAGCGGCGCGAACGAGGAACCGTCCGAAGGGGCCGACGAACCGCCGAAAACCGACGGCGACGGC
TCGAAAGGCGGCAGCAGACCTCGCCTCAAGATCGTGAAATGA

Upstream 100 bases:

>100_bases
CGCCGTCCGAAAAGGTCATGCGTCGTTAATGTTGCAATGAAGGCATGACGGAGCGGGTGGCGCGGCGTGCCGCGCGCCCG
CTCCGGGTTCGAGGATTGTG

Downstream 100 bases:

>100_bases
GGTAGAATCTCGCGCTACGCCGGCTTAGCTCATCTGGTAGAGCAGTTGATTTGTAATCATCAGGTGGCGGGTTCGAGTCC
TGCAGCCGGCACCAATAGAA

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGEDSGAFDDDAAPADDAQRDESVSPLAPVADSGANEEPSEGADEPPKTDGDG
SKGGSRPRLKIVK

Sequences:

>Translated_173_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGEDSGAFDDDAAPADDAQRDESVSPLAPVADSGANEEPSEGADEPPKTDGDG
SKGGSRPRLKIVK
>Mature_173_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQMGNEWIEFTARFSGKAHKIE
IPVANVLAIYARENGQGMAFQVDAVAGEGEDSGAFDDDAAPADDAQRDESVSPLAPVADSGANEEPSEGADEPPKTDGDG
SKGGSRPRLKIVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=119, Percent_Identity=46.218487394958, Blast_Score=111, Evalue=2e-26,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 18727; Mature: 18727

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEIPVANVLAIYARENGQGMAFQVDAVAGEGEDSGAFDDDAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
PADDAQRDESVSPLAPVADSGANEEPSEGADEPPKTDGDGSKGGSRPRLKIVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNSTRVPRQFVRDGEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEEECCCCCCHH
MGNEWIEFTARFSGKAHKIEIPVANVLAIYARENGQGMAFQVDAVAGEGEDSGAFDDDAA
CCCCEEEEEEECCCCEEEEECCHHHEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
PADDAQRDESVSPLAPVADSGANEEPSEGADEPPKTDGDGSKGGSRPRLKIVK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]