| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisA [H]
Identifier: 116688454
GI number: 116688454
Start: 479556
End: 480311
Strand: Direct
Name: hisA [H]
Synonym: Bcen2424_0430
Alternate gene names: 116688454
Gene position: 479556-480311 (Clockwise)
Preceding gene: 116688453
Following gene: 116688455
Centisome position: 13.76
GC content: 64.29
Gene sequence:
>756_bases ATGTTGCTGATTCCGGCCATCGACCTCAAAGACGGTCAGTGTGTGCGCCTCAAACAGGGCGATATGGACCAGGCCACGAT TTTTTCCGAGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACG GCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAG CTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGC CGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGG ACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTAC GGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCAGGGCATCAACATCGACGCGACCGTGAAGCT CGCGCAGGCGGTCGGCATCCCGGTGATCGCCAGCGGCGGCCTGTCGAACCTCCCGGACATCGAGAGCCTGTGCGAAGTGG AAGAGCACGGCGTCGAAGGCGTGATCTGCGGCCGTGCGATCTACTCCGGCGATCTCGATTTCGCGGCCGCGCAGAAGCGC GCGGACGAACTGAACGGCGAACTCGACAACGCGTAA
Upstream 100 bases:
>100_bases AGCGCCGAAAGAGTTGTACTAAACTAGCGAGACGGCGCGGCACCGGTTTGGCCGGTACGCGCCGGATTCTTTTCTTTTTC CACGACGACACCCGATTGCT
Downstream 100 bases:
>100_bases CCGCGGTCGTCCCGTTCGCCGGGGCTGCCCGCAGGCGGCCCCGACCGGAAGCCTCGCGCGAGGCTTCCGCAACCGGCCGT CCCAGCGCGGCATTTGGCGC
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILDEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKNPGFLQDACTAFSGSIIVGLDAKDGKVATDGWSKLTGHEVIDLAKKFEDY GVESIVYTDIGRDGMLQGINIDATVKLAQAVGIPVIASGGLSNLPDIESLCEVEEHGVEGVICGRAIYSGDLDFAAAQKR ADELNGELDNA
Sequences:
>Translated_251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILDEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKNPGFLQDACTAFSGSIIVGLDAKDGKVATDGWSKLTGHEVIDLAKKFEDY GVESIVYTDIGRDGMLQGINIDATVKLAQAVGIPVIASGGLSNLPDIESLCEVEEHGVEGVICGRAIYSGDLDFAAAQKR ADELNGELDNA >Mature_251_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKPKNLEAIEAILDEVGDEIPVQ LGGGIRSLETIEKYLDAGLSYVIIGTAAVKNPGFLQDACTAFSGSIIVGLDAKDGKVATDGWSKLTGHEVIDLAKKFEDY GVESIVYTDIGRDGMLQGINIDATVKLAQAVGIPVIASGGLSNLPDIESLCEVEEHGVEGVICGRAIYSGDLDFAAAQKR ADELNGELDNA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=32.5102880658436, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788336, Length=213, Percent_Identity=24.8826291079812, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26570; Mature: 26570
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNLEAIEAILDEVGDEIPVQLGGGIRSLETIEKYLDAGLSYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH AFSGSIIVGLDAKDGKVATDGWSKLTGHEVIDLAKKFEDYGVESIVYTDIGRDGMLQGIN HHCCCEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IDATVKLAQAVGIPVIASGGLSNLPDIESLCEVEEHGVEGVICGRAIYSGDLDFAAAQKR CCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHH ADELNGELDNA HHHHCCCCCCC >Mature Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEDPAAMARKWVDLGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNLEAIEAILDEVGDEIPVQLGGGIRSLETIEKYLDAGLSYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHH AFSGSIIVGLDAKDGKVATDGWSKLTGHEVIDLAKKFEDYGVESIVYTDIGRDGMLQGIN HHCCCEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IDATVKLAQAVGIPVIASGGLSNLPDIESLCEVEEHGVEGVICGRAIYSGDLDFAAAQKR CCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHH ADELNGELDNA HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA