| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is hisH [H]
Identifier: 116688453
GI number: 116688453
Start: 478751
End: 479392
Strand: Direct
Name: hisH [H]
Synonym: Bcen2424_0429
Alternate gene names: 116688453
Gene position: 478751-479392 (Clockwise)
Preceding gene: 116688452
Following gene: 116688454
Centisome position: 13.74
GC content: 66.67
Gene sequence:
>642_bases ATGAAAACTTCGATTGCGATTGTGGATTATGGGATGGGCAACCTGCGCTCGGTCGCGCAGGCGCTCAAGAAGGCCGAACC GGCCGCCGACGTGGCGATCGTCGACACGCCGGCCGCGATTCGCGCGGCCGACCGCGTCGTGCTGCCCGGCCAGGGCGCGA TGCCCGACTGCATGCGCTGTCTCGGCGAATCGGGCCTGCAGGAGGCCGTGATCGAGGCGTCGCGCACGAAGCCGCTGCTC GGCGTGTGCGTCGGCGAGCAGATGCTGTTCGACTGGAGTGCGGAAGGCGACACGAAGGGCCTCGGCCTGTTGCCGGGCAA GGTCGTGCGCTTCGAACTCGACGGCCGCGTGCAGGACGACGGCTCGCGCTTCAAGGTGCCGCAGATGGGCTGGAACCGCG TGCGCCAGGCGCAGCCGCACCCGCTGTGGGACGGCGTGCCCGATGACGCGTATTTCTACTTCGTGCACAGCTATTACGTG AGCCCGGACAACCCGGCGCATACGGTCGGCGAAACGGCCTACGGCGCGCCGTTTACGTCCGCGGTCGCGCGGGACAATCT CTTCGCGACCCAATTCCACCCCGAGAAAAGCGCGGAGGTCGGGTTGCGTCTGTATCGCAACTTCGTACACTGGAAACCGT AA
Upstream 100 bases:
>100_bases CCGGCATCAACATCGCCACACGGCTGATGGGTCTGATGCTGTCGGCGCTGGCGGTGGAATTCATCGTCAATGGACTGAGG GCGCTACTGCCTGCACTGAG
Downstream 100 bases:
>100_bases ACGTGGTGCGGGAGCCACAGTCGACGGCGCGCAAGCGCCTGTCGTGCGGGGCTCTCACGCTTAAGCGCCGAAAGAGTTGT ACTAAACTAGCGAGACGGCG
Product: imidazole glycerol phosphate synthase subunit HisH
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQEAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRVQDDGSRFKVPQMGWNRVRQAQPHPLWDGVPDDAYFYFVHSYYV SPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP
Sequences:
>Translated_213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQEAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRVQDDGSRFKVPQMGWNRVRQAQPHPLWDGVPDDAYFYFVHSYYV SPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP >Mature_213_residues MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRCLGESGLQEAVIEASRTKPLL GVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRVQDDGSRFKVPQMGWNRVRQAQPHPLWDGVPDDAYFYFVHSYYV SPDNPAHTVGETAYGAPFTSAVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR [H]
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788334, Length=212, Percent_Identity=35.8490566037736, Blast_Score=120, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6319725, Length=218, Percent_Identity=31.651376146789, Blast_Score=101, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 23322; Mature: 23322
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRC CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEECCCCCCHHHHHH LGESGLQEAVIEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRVQDD HCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEECC GSRFKVPQMGWNRVRQAQPHPLWDGVPDDAYFYFVHSYYVSPDNPAHTVGETAYGAPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP HHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTSIAIVDYGMGNLRSVAQALKKAEPAADVAIVDTPAAIRAADRVVLPGQGAMPDCMRC CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEECCCCCCHHHHHH LGESGLQEAVIEASRTKPLLGVCVGEQMLFDWSAEGDTKGLGLLPGKVVRFELDGRVQDD HCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEEECCEEECC GSRFKVPQMGWNRVRQAQPHPLWDGVPDDAYFYFVHSYYVSPDNPAHTVGETAYGAPFTS CCEEECCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHCCCCCCCCCHHH AVARDNLFATQFHPEKSAEVGLRLYRNFVHWKP HHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12754231 [H]