| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688443
Identifier: 116688443
GI number: 116688443
Start: 470341
End: 470616
Strand: Direct
Name: 116688443
Synonym: Bcen2424_0419
Alternate gene names: NA
Gene position: 470341-470616 (Clockwise)
Preceding gene: 116688442
Following gene: 116688444
Centisome position: 13.5
GC content: 71.74
Gene sequence:
>276_bases GTGAGCGGCTTCGAAGCCGGCTCCTCGCTGACCGTCGCGAGCGCGAAGTCCGCGCTCGCGGACGGTCTTGCGCGCATCGG CGCCGGCGCGACCGCCGTCGATTGCGCGGCGCTGACGCAGTTCGACTCGTCCGCGCTCGCCGTGCTGCTCGCATGGCAAC GTGCCGCCCAAGCGCGCGGCGCAGCCCTCGACATCCTCAATCTCCCTCCGAAGCTCGCCAGCCTCGCGCGCGCCTACGGC GTCGACGCACTCATCGAAGGCACCGGGCGACATTGA
Upstream 100 bases:
>100_bases AGCAGCAGTTCAACGAGAAGATCCAGCAAAGCGGCGTGGACGGCCTGATCAAGTTCCTGACGCAGCGCAACCAGGAACTT GCCGCGGGCAAGCAGGCGTC
Downstream 100 bases:
>100_bases CCCTGTCCGACCGAAGCCTGCCGCGCCAGCCGGCGCGCGCACGCTTCAGGCCGCGCGCCGTCGGCGCCGGCTCCACCAGC CGGTTTGCCCTATAATCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSGFEAGSSLTVASAKSALADGLARIGAGATAVDCAALTQFDSSALAVLLAWQRAAQARGAALDILNLPPKLASLARAYG VDALIEGTGRH
Sequences:
>Translated_91_residues MSGFEAGSSLTVASAKSALADGLARIGAGATAVDCAALTQFDSSALAVLLAWQRAAQARGAALDILNLPPKLASLARAYG VDALIEGTGRH >Mature_90_residues SGFEAGSSLTVASAKSALADGLARIGAGATAVDCAALTQFDSSALAVLLAWQRAAQARGAALDILNLPPKLASLARAYGV DALIEGTGRH
Specific function: Unknown
COG id: COG3113
COG function: function code R; Predicted NTP binding protein (contains STAS domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9053; Mature: 8922
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFEAGSSLTVASAKSALADGLARIGAGATAVDCAALTQFDSSALAVLLAWQRAAQARG CCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC AALDILNLPPKLASLARAYGVDALIEGTGRH CEEEECCCCHHHHHHHHHHCCHHEECCCCCC >Mature Secondary Structure SGFEAGSSLTVASAKSALADGLARIGAGATAVDCAALTQFDSSALAVLLAWQRAAQARG CCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC AALDILNLPPKLASLARAYGVDALIEGTGRH CEEEECCCCHHHHHHHHHHCCHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA