| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mmlH [H]
Identifier: 116688431
GI number: 116688431
Start: 458448
End: 459710
Strand: Reverse
Name: mmlH [H]
Synonym: Bcen2424_0407
Alternate gene names: 116688431
Gene position: 459710-458448 (Counterclockwise)
Preceding gene: 116688432
Following gene: 116688430
Centisome position: 13.2
GC content: 66.75
Gene sequence:
>1263_bases ATGCAGGCATTCCAGTGGTTCAACGAATTGTCGACGCGCGAGCGCCGGACGCTGTACGCCGGATTCGGCGGCTATGCGGT CGATGCGTTCGACTTCATGATCTATTCGTTCCTGATCCCGACGCTGATCGCCACCTGGGGCATGACGAAGAGCGAGGCCG GGATGATCGCGACCAGTTCGCTGATCTCGTCGGCGATCGGCGGCTGGGTCGCCGGCATCCTCGCCGACCGCTATGGCCGC GTGCGCGTGTTGCAGTGGACGATCGCGACGTTCGCGCTGTTCACGTGCCTGTCCGGCTTCACGCATTCGTTCTGGCAGCT CCTTGCGACGCGCACGCTGCAGGGTTTCGGCTTCGGCGGCGAATGGTCGGTCGTGACGATCATGATGGCCGAGACGATCC GCTCGCCCGAGCATCGCGCGAAGGCCGTCGGCACCGTGCAGAGCAGCTGGTCGTTCGGCTGGGGCGCGGCCGCGATCCTC TACTGGGCGTTCTTCGCGCTGCTGCCGGAGCAGGTCGCGTGGCGCGCGTGCTTCTGGATCGGCATCGTGCCCGCCCTGTG GATTCTCTATATCCGCCGCAACGTCAGCGATCCGGACATCTATACGGCCACGCGCCGCGCCCGCGACGAAGGCCGCGTGT CGGGCCACTTCCTCGAGATCTTCTCGCCGCCGCACCTGCGCGCGACGCTGTTCGGCAGCGCGCTGTGCACCGGCATGCTC GGCGGCTACTACGCGATCACGACGTGGCTGCCCACCTATCTCAAGACTGTGCGCCACCTGTCGGTGTTCAACACGAGCGG CTATCTGGTCGTGCTGATCGTCGGCTCGTTCGTCGGCTACGTGGTCGGCGCGATCCTGTCCGACCGGCTCGGCCGCCGCG CGTCCTTCATCCTGTTCGCGGTCGGCTCGTTCTCGCTTGGCATGGCGTACACGATGCTGCCGATCACCGATACCGCGATG CTGCTGCTCGGCTTTCCACTCGGCATCGTCGTGCAGGGCATCTTCGCCGGCGTCGGCGCGTATCTGTCGGAGCTGTATCC GGGCGCGATCCGCGGCTCGGGCCAGGGCTTCTGCTACAACCTCGGCCGCGGGCTCGGTTCGTTCTTTCCGATCCTCGTCG GCGCGCTGTCGCAATCGATGTCGCTCGTGAAGGCGATCGGCCTCGTCGCGGGCGGCGGCTATCTGCTGGTGATCGTCGCG GCGCTCGTGCTGCCGGAAACGCGCGGCAAGTCGCTCGTCGACGATCCGGCCGTCGCGTCGTGA
Upstream 100 bases:
>100_bases CACAAACCTGCATCCGCCTTTTTGGCATGCCGGAGCGCGCCCGTAAAATAACCGCGACGCGGTAGCGCGGGACGAGACAA GACGAGAGGGGGCGGCAAGC
Downstream 100 bases:
>100_bases GCCACCGCCTCGTTCCGGACACCGCATGCACGTGATCGTTCTCGGCGCCGGCGTGATCGGCGTCACCACCGCCTGGCACC TGCGCGAAGCAGGCTGCGAC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MQAFQWFNELSTRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIATWGMTKSEAGMIATSSLISSAIGGWVAGILADRYGR VRVLQWTIATFALFTCLSGFTHSFWQLLATRTLQGFGFGGEWSVVTIMMAETIRSPEHRAKAVGTVQSSWSFGWGAAAIL YWAFFALLPEQVAWRACFWIGIVPALWILYIRRNVSDPDIYTATRRARDEGRVSGHFLEIFSPPHLRATLFGSALCTGML GGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAILSDRLGRRASFILFAVGSFSLGMAYTMLPITDTAM LLLGFPLGIVVQGIFAGVGAYLSELYPGAIRGSGQGFCYNLGRGLGSFFPILVGALSQSMSLVKAIGLVAGGGYLLVIVA ALVLPETRGKSLVDDPAVAS
Sequences:
>Translated_420_residues MQAFQWFNELSTRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIATWGMTKSEAGMIATSSLISSAIGGWVAGILADRYGR VRVLQWTIATFALFTCLSGFTHSFWQLLATRTLQGFGFGGEWSVVTIMMAETIRSPEHRAKAVGTVQSSWSFGWGAAAIL YWAFFALLPEQVAWRACFWIGIVPALWILYIRRNVSDPDIYTATRRARDEGRVSGHFLEIFSPPHLRATLFGSALCTGML GGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAILSDRLGRRASFILFAVGSFSLGMAYTMLPITDTAM LLLGFPLGIVVQGIFAGVGAYLSELYPGAIRGSGQGFCYNLGRGLGSFFPILVGALSQSMSLVKAIGLVAGGGYLLVIVA ALVLPETRGKSLVDDPAVAS >Mature_420_residues MQAFQWFNELSTRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIATWGMTKSEAGMIATSSLISSAIGGWVAGILADRYGR VRVLQWTIATFALFTCLSGFTHSFWQLLATRTLQGFGFGGEWSVVTIMMAETIRSPEHRAKAVGTVQSSWSFGWGAAAIL YWAFFALLPEQVAWRACFWIGIVPALWILYIRRNVSDPDIYTATRRARDEGRVSGHFLEIFSPPHLRATLFGSALCTGML GGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAILSDRLGRRASFILFAVGSFSLGMAYTMLPITDTAM LLLGFPLGIVVQGIFAGVGAYLSELYPGAIRGSGQGFCYNLGRGLGSFFPILVGALSQSMSLVKAIGLVAGGGYLLVIVA ALVLPETRGKSLVDDPAVAS
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082404, Length=378, Percent_Identity=27.2486772486773, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI87082231, Length=442, Percent_Identity=24.4343891402715, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1790550, Length=438, Percent_Identity=25.5707762557078, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI87082159, Length=365, Percent_Identity=27.1232876712329, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87081723, Length=337, Percent_Identity=25.8160237388724, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788942, Length=393, Percent_Identity=25.1908396946565, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1789152, Length=344, Percent_Identity=25.2906976744186, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI32564663, Length=443, Percent_Identity=24.3792325056433, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45594; Mature: 45594
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFQWFNELSTRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIATWGMTKSEAGMIATSS CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LISSAIGGWVAGILADRYGRVRVLQWTIATFALFTCLSGFTHSFWQLLATRTLQGFGFGG HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EWSVVTIMMAETIRSPEHRAKAVGTVQSSWSFGWGAAAILYWAFFALLPEQVAWRACFWI CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVPALWILYIRRNVSDPDIYTATRRARDEGRVSGHFLEIFSPPHLRATLFGSALCTGML HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH GGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAILSDRLGRRASFILFA CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHEEEEE VGSFSLGMAYTMLPITDTAMLLLGFPLGIVVQGIFAGVGAYLSELYPGAIRGSGQGFCYN CCCHHHHHHHEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LGRGLGSFFPILVGALSQSMSLVKAIGLVAGGGYLLVIVAALVLPETRGKSLVDDPAVAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQAFQWFNELSTRERRTLYAGFGGYAVDAFDFMIYSFLIPTLIATWGMTKSEAGMIATSS CCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH LISSAIGGWVAGILADRYGRVRVLQWTIATFALFTCLSGFTHSFWQLLATRTLQGFGFGG HHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EWSVVTIMMAETIRSPEHRAKAVGTVQSSWSFGWGAAAILYWAFFALLPEQVAWRACFWI CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVPALWILYIRRNVSDPDIYTATRRARDEGRVSGHFLEIFSPPHLRATLFGSALCTGML HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH GGYYAITTWLPTYLKTVRHLSVFNTSGYLVVLIVGSFVGYVVGAILSDRLGRRASFILFA CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCHHHEEEEE VGSFSLGMAYTMLPITDTAMLLLGFPLGIVVQGIFAGVGAYLSELYPGAIRGSGQGFCYN CCCHHHHHHHEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LGRGLGSFFPILVGALSQSMSLVKAIGLVAGGGYLLVIVAALVLPETRGKSLVDDPAVAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]