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The map label for this gene is ugpA [H]

Identifier: 116688420

GI number: 116688420

Start: 442625

End: 443509

Strand: Direct

Name: ugpA [H]

Synonym: Bcen2424_0396

Alternate gene names: 116688420

Gene position: 442625-443509 (Clockwise)

Preceding gene: 116688419

Following gene: 116688421

Centisome position: 12.7

GC content: 65.88

Gene sequence:

>885_bases
ATGCAATCCCGTTCCCGTTTCGGTACGAGCCCGGTGCCGTACCTGCTGATCGCGCCGCAGCTCGCGATCACCGCCGTGTT
CTTCCTGTGGCCGGCCGGCGTCGCGCTGTGGCAGTCCACGCAGACGCAGGACGCGTTCGGCACGTCGAGCGAGTTCGTCG
GCCTCGCGAACTTCACGCACCTGTTCGCCGATCCGCTGTATCTCGATTCGATGCGCACGACGCTCGTGTTCAGTTCGCTG
GTCACGGTGAGCGGGCTCGTCGTGTCGCTGCTGCTCGCCGCGTGCGCCGACCGCGTGATCCGCGGCGCGCGCGTGTACCG
CACGCTGCTGATCTGGCCGTACGCGGTCGCACCGACGATCGCGGCCGTGCTGTGGGCATTCCTGTTCAACCCGAGCATCG
GCCTGATCACATATGCGCTCGCGAAGGGCGGCATCGTGTGGAACCATGCGCTGAACGGCGAGCAGGCGATGTTCCTCGTC
GTGCTGGCGTCGGTGTGGAAGCAGGTGAGCTACAACTTCCTGTTCTTCTACGCGGGGCTGCAGGCGATTCCGCGCTCGCT
GATCGAGGCGGCGGCGATCGACGGTGCGGGGCCGGTGCGGCGCTTCTTCAACATCGTGCTGCCGCTGCTGTCGCCGACGA
GTTTCTTCCTGCTGGTCGTGAACCTCGTCTACGCATTCTTCGACACCTTCCCGGTGATCGACGCGGCCACCGGCGGCGGC
CCGGCGCAGAGCACCAGGACGCTGATCTACAAGATCTTCGCGGAGGGCTTCCAGGGGCTCGACATCGGCAGCTCGGGCGC
GCAGTCGGTCGTGCTGATGATCATCGTCGTCGCGCTCACGGTGATCCAGTTCCGCTTCGTCGAACGCAGGGTGCAATACG
CATGA

Upstream 100 bases:

>100_bases
CTGAGCACGCATCGCCTCGTGCCGCCGGCGGTATCGCGCGTCAGCGCATGCCGTCCGGCGGCGCGGTTTCCTTTCCGTTT
CGCCTGACCGGATATCCGCG

Downstream 100 bases:

>100_bases
TCGAAAATCGCAAGGGCTTCGACCTGTTCTGCCACGCGGTGCTGATCGCGGGCGTGGTGCTGATCGTGTTCCCTGTCTAC
GTCGCGTTCTGCGCGGCGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQSRSRFGTSPVPYLLIAPQLAITAVFFLWPAGVALWQSTQTQDAFGTSSEFVGLANFTHLFADPLYLDSMRTTLVFSSL
VTVSGLVVSLLLAACADRVIRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLITYALAKGGIVWNHALNGEQAMFLV
VLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVNLVYAFFDTFPVIDAATGGG
PAQSTRTLIYKIFAEGFQGLDIGSSGAQSVVLMIIVVALTVIQFRFVERRVQYA

Sequences:

>Translated_294_residues
MQSRSRFGTSPVPYLLIAPQLAITAVFFLWPAGVALWQSTQTQDAFGTSSEFVGLANFTHLFADPLYLDSMRTTLVFSSL
VTVSGLVVSLLLAACADRVIRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLITYALAKGGIVWNHALNGEQAMFLV
VLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVNLVYAFFDTFPVIDAATGGG
PAQSTRTLIYKIFAEGFQGLDIGSSGAQSVVLMIIVVALTVIQFRFVERRVQYA
>Mature_294_residues
MQSRSRFGTSPVPYLLIAPQLAITAVFFLWPAGVALWQSTQTQDAFGTSSEFVGLANFTHLFADPLYLDSMRTTLVFSSL
VTVSGLVVSLLLAACADRVIRGARVYRTLLIWPYAVAPTIAAVLWAFLFNPSIGLITYALAKGGIVWNHALNGEQAMFLV
VLASVWKQVSYNFLFFYAGLQAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVNLVYAFFDTFPVIDAATGGG
PAQSTRTLIYKIFAEGFQGLDIGSSGAQSVVLMIIVVALTVIQFRFVERRVQYA

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=291, Percent_Identity=69.0721649484536, Blast_Score=389, Evalue=1e-110,
Organism=Escherichia coli, GI1790465, Length=250, Percent_Identity=32.4, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=30.1587301587302, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32069; Mature: 32069

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRSRFGTSPVPYLLIAPQLAITAVFFLWPAGVALWQSTQTQDAFGTSSEFVGLANFTH
CCCCCCCCCCCCCHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LFADPLYLDSMRTTLVFSSLVTVSGLVVSLLLAACADRVIRGARVYRTLLIWPYAVAPTI
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLWAFLFNPSIGLITYALAKGGIVWNHALNGEQAMFLVVLASVWKQVSYNFLFFYAGL
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVNLVYAFFDTFPVIDAATGGG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHCCCCCCC
PAQSTRTLIYKIFAEGFQGLDIGSSGAQSVVLMIIVVALTVIQFRFVERRVQYA
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSRSRFGTSPVPYLLIAPQLAITAVFFLWPAGVALWQSTQTQDAFGTSSEFVGLANFTH
CCCCCCCCCCCCCHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
LFADPLYLDSMRTTLVFSSLVTVSGLVVSLLLAACADRVIRGARVYRTLLIWPYAVAPTI
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLWAFLFNPSIGLITYALAKGGIVWNHALNGEQAMFLVVLASVWKQVSYNFLFFYAGL
HHHHHHHHHCCCHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIPRSLIEAAAIDGAGPVRRFFNIVLPLLSPTSFFLLVVNLVYAFFDTFPVIDAATGGG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHCCCCCCC
PAQSTRTLIYKIFAEGFQGLDIGSSGAQSVVLMIIVVALTVIQFRFVERRVQYA
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA