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The map label for this gene is ugpB [H]

Identifier: 116688419

GI number: 116688419

Start: 441197

End: 442528

Strand: Direct

Name: ugpB [H]

Synonym: Bcen2424_0395

Alternate gene names: 116688419

Gene position: 441197-442528 (Clockwise)

Preceding gene: 116688418

Following gene: 116688420

Centisome position: 12.66

GC content: 65.24

Gene sequence:

>1332_bases
ATGAAGAAGCCTGCGGGGACACTGGTTCGTTCGATCGCGCTCGGCGGCGCGCTGATATTCGGGGTACAGCACGTGGCGCT
CGCCGCGACGGAAATCCAGTTCTGGCATGCGATGGAGGCCGCGCTCGGCGAGCGGGTCAATGCGATCGCCGATCAGTTCA
ACGCGTCGCAAAGCGATTACAAGATCGTGCCGGTCTACAAGGGCACCTACGACCAGGCGCTCGCAGCGGGCATCGCGGCC
TATCGCAGCGGCAACGCGCCGGCGATCCTCCAGGTCTATGAAGTCGGCACGGCGACGATGATGCAGGCGAAGAAGGCGGT
CGTGCCGGTCTACGACGTGTTCAAGCAGGCGGGCGTGACGCTCGACGAAAAGGCGTTCGTGCCGACCATCGCGAGCTACT
ACAGCGACGCGAAGACGGGCCACCTCGTGTCGATGCCGTTCAACAGCTCGACGCCGGTGCTGTACTACAACAAGGACGCG
TTCAAGAAGGCGGGCCTCGATCCGAACCAGCCGCCGAAGACGTGGGCCGACGTGAAAGCGGATGCCGAGAAGCTGCGCAA
ATCCGGGATGGCCTGCGGCTTCACGACCGGCTGGCAAGGCTGGATCCAGCTCGAAAACTACAGCGCGTGGCACGGGCTGC
CGTTCGCGAGCCGCAACAACGGCTTCGACGGCACCGACGCCGTGCTCGAGTTCAACAAGCCGCAGCAAATCGAACACATC
TCCTTCCTCCAGCAGATGGCGAAGGACGGCACGTTCACGTACGCGGGCCGCAAGGACGAAGCGTCGGCGAAGTTCTACAG
CGGCGACTGCGGGATCCTCACGACGTCGTCGGGCGCGCTCGCGAACGTGCAGAAATTCGCGAAGTTCAGCTACGGCACGG
GCATGCTGCCGTACGACGCGAACGTGAAGGGCGCGCCGCAGAACGCGATCATCGGCGGCGCGAGCCTGTGGGTGCTGGCC
GGCAAGGACCCGGCGACCTACAAGGGCGTCGCGAAATTCCTCTCTTACCTGGCTTCGCCCGCGGTCGCCGCGAAGTGGCA
CCAGGACACCGGCTACCTGCCGGTCACGACCGCCGCGTACGACCTGACGCGCCAGCAGGGCTTCTACGCGAAGAACCCGA
GCGCCGAAACCGCGATCAAGCAGATGCTGAACAAGCCGCCGCTGCCGTACACGAAGGGGCTGCGCCTGGGCAACATGCCG
CAGATCCGCACGGTGGTCGACGAGGAGTTCGAACAGGTCTGGGCGCAGAAGAAGTCGCCGAAGGACGCGCTCGATTCGGC
TGCGTCGCGCGGCGACGAACTGCTGCGCCGCTTCGAGAAGTCGGGCGGCTGA

Upstream 100 bases:

>100_bases
AACGACAACTGACTGTCACAAACGATCACTAGACTTCGCCGGTTCAATGGCGACGGGAATGTTGCACACGCTGTTGGTAA
CGTTTTCATAGGAGAGGTCG

Downstream 100 bases:

>100_bases
GCACGCATCGCCTCGTGCCGCCGGCGGTATCGCGCGTCAGCGCATGCCGTCCGGCGGCGCGGTTTCCTTTCCGTTTCGCC
TGACCGGATATCCGCGATGC

Product: glycerol-3-phosphate transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKKPAGTLVRSIALGGALIFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVYKGTYDQALAAGIAA
YRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVTLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDA
FKKAGLDPNQPPKTWADVKADAEKLRKSGMACGFTTGWQGWIQLENYSAWHGLPFASRNNGFDGTDAVLEFNKPQQIEHI
SFLQQMAKDGTFTYAGRKDEASAKFYSGDCGILTTSSGALANVQKFAKFSYGTGMLPYDANVKGAPQNAIIGGASLWVLA
GKDPATYKGVAKFLSYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMP
QIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG

Sequences:

>Translated_443_residues
MKKPAGTLVRSIALGGALIFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVYKGTYDQALAAGIAA
YRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVTLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDA
FKKAGLDPNQPPKTWADVKADAEKLRKSGMACGFTTGWQGWIQLENYSAWHGLPFASRNNGFDGTDAVLEFNKPQQIEHI
SFLQQMAKDGTFTYAGRKDEASAKFYSGDCGILTTSSGALANVQKFAKFSYGTGMLPYDANVKGAPQNAIIGGASLWVLA
GKDPATYKGVAKFLSYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMP
QIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG
>Mature_443_residues
MKKPAGTLVRSIALGGALIFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDYKIVPVYKGTYDQALAAGIAA
YRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVTLDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDA
FKKAGLDPNQPPKTWADVKADAEKLRKSGMACGFTTGWQGWIQLENYSAWHGLPFASRNNGFDGTDAVLEFNKPQQIEHI
SFLQQMAKDGTFTYAGRKDEASAKFYSGDCGILTTSSGALANVQKFAKFSYGTGMLPYDANVKGAPQNAIIGGASLWVLA
GKDPATYKGVAKFLSYLASPAVAAKWHQDTGYLPVTTAAYDLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMP
QIRTVVDEEFEQVWAQKKSPKDALDSAASRGDELLRRFEKSGG

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=70.6730769230769, Blast_Score=646, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 48003; Mature: 48003

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPAGTLVRSIALGGALIFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
KIVPVYKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVT
EEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCCC
LDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGLDPNQPPKTWADVKA
CCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHH
DAEKLRKSGMACGFTTGWQGWIQLENYSAWHGLPFASRNNGFDGTDAVLEFNKPQQIEHI
HHHHHHHCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHH
SFLQQMAKDGTFTYAGRKDEASAKFYSGDCGILTTSSGALANVQKFAKFSYGTGMLPYDA
HHHHHHHHCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC
NVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLSYLASPAVAAKWHQDTGYLPVTTAAY
CCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCEEEEHHHH
DLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEEFEQVWAQKKSP
HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
KDALDSAASRGDELLRRFEKSGG
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKPAGTLVRSIALGGALIFGVQHVALAATEIQFWHAMEAALGERVNAIADQFNASQSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
KIVPVYKGTYDQALAAGIAAYRSGNAPAILQVYEVGTATMMQAKKAVVPVYDVFKQAGVT
EEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHCCCC
LDEKAFVPTIASYYSDAKTGHLVSMPFNSSTPVLYYNKDAFKKAGLDPNQPPKTWADVKA
CCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHH
DAEKLRKSGMACGFTTGWQGWIQLENYSAWHGLPFASRNNGFDGTDAVLEFNKPQQIEHI
HHHHHHHCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHH
SFLQQMAKDGTFTYAGRKDEASAKFYSGDCGILTTSSGALANVQKFAKFSYGTGMLPYDA
HHHHHHHHCCCEEECCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCC
NVKGAPQNAIIGGASLWVLAGKDPATYKGVAKFLSYLASPAVAAKWHQDTGYLPVTTAAY
CCCCCCCCCEECCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHEEECCCCCCEEEEHHHH
DLTRQQGFYAKNPSAETAIKQMLNKPPLPYTKGLRLGNMPQIRTVVDEEFEQVWAQKKSP
HHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
KDALDSAASRGDELLRRFEKSGG
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA