Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 116688313

GI number: 116688313

Start: 331286

End: 332116

Strand: Reverse

Name: rsmI [H]

Synonym: Bcen2424_0289

Alternate gene names: 116688313

Gene position: 332116-331286 (Counterclockwise)

Preceding gene: 116688318

Following gene: 116688309

Centisome position: 9.53

GC content: 72.2

Gene sequence:

>831_bases
GTGGTCGCCACACCGATCGGCAATACGGCCGACATCACGCTGCGCGCGCTGCACGTGCTCGGCCTCGCCGACCGCATCGC
CGCCGAAGACACCCGCAACACGGGGCAGCTGCTCGCCCGCTACGGGATCTCGAAACCGCTCGTCGCCGTGCACGAGCACA
ACGAACGCGAAGCCGCGCAGCGCGTGATCGAACTGCTGCGTGGCGGCGAACGCGTGGCCTACGTGTCGGACGCCGGCACG
CCCGGCATCTCGGACCCCGGCGCGCGCCTCGTCGACGCCGTGCGCGCGGCCGGCTTCACGGTGGTTCCGCTGCCTGGCGC
GAGCGCGGCCGTGACCGCGCTGAGCGTGGCCGGTGACTGGGCCGGCGCGTTCACGTTCGCGGGCTTCCTGCCGCCGAAGG
CGAAACAGCGCGCGACCGCGCTGCAGGCGCTGGTGTCGCACCCGTACGCGCTGGTGTTCTACGAAGCGCCGCACCGGATC
GCCGAAACCGTCGCCGCGCTCGCCGAAGCGTTCGGCCCCGCGCGCCGGCTGCTGATCGCGCGCGAGCTCACCAAGCTACA
CGAGCAGTTGTTCCAGGGCACCCTGGCCGAAGGACAGAGCTGGCTCGCCGGCGATGCGAACCGGCAGCGCGGCGAGTTCG
TGCTGGTGGTCGAAGGCGCGCCGGCGGCCAGCGGCGAAGCCGACGACACCGCGCACGACGCGCTGCTCAGGCTGCTGCTG
GAAGAGGTGCCGGTGAAGAGCGCGGCGAAGCTCGCGGCCGCGCTGACGGGCGCATCGCGCAACACGCTGTATGCGCGTGC
GCTCGTGCTGAAGGAAGGCAAGGAGGACTGA

Upstream 100 bases:

>100_bases
CGTCCTTGTTCCGTTCGTGCCGCGACCGCGTGCATTGCCTGCCATGACTGCCCTCCTCGAACTCGCGCATACGCAGCACT
ACCCGGACGCCACGCTCTAC

Downstream 100 bases:

>100_bases
CGCGCGACGCCGCCGCGCGGAATCGGCATAGGGGACGACCATGAGGCCGTACCCCTGCCACACCACCCGGCATGCGGGTC
CGCACCGGGCGGTTCGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MVATPIGNTADITLRALHVLGLADRIAAEDTRNTGQLLARYGISKPLVAVHEHNEREAAQRVIELLRGGERVAYVSDAGT
PGISDPGARLVDAVRAAGFTVVPLPGASAAVTALSVAGDWAGAFTFAGFLPPKAKQRATALQALVSHPYALVFYEAPHRI
AETVAALAEAFGPARRLLIARELTKLHEQLFQGTLAEGQSWLAGDANRQRGEFVLVVEGAPAASGEADDTAHDALLRLLL
EEVPVKSAAKLAAALTGASRNTLYARALVLKEGKED

Sequences:

>Translated_276_residues
MVATPIGNTADITLRALHVLGLADRIAAEDTRNTGQLLARYGISKPLVAVHEHNEREAAQRVIELLRGGERVAYVSDAGT
PGISDPGARLVDAVRAAGFTVVPLPGASAAVTALSVAGDWAGAFTFAGFLPPKAKQRATALQALVSHPYALVFYEAPHRI
AETVAALAEAFGPARRLLIARELTKLHEQLFQGTLAEGQSWLAGDANRQRGEFVLVVEGAPAASGEADDTAHDALLRLLL
EEVPVKSAAKLAAALTGASRNTLYARALVLKEGKED
>Mature_276_residues
MVATPIGNTADITLRALHVLGLADRIAAEDTRNTGQLLARYGISKPLVAVHEHNEREAAQRVIELLRGGERVAYVSDAGT
PGISDPGARLVDAVRAAGFTVVPLPGASAAVTALSVAGDWAGAFTFAGFLPPKAKQRATALQALVSHPYALVFYEAPHRI
AETVAALAEAFGPARRLLIARELTKLHEQLFQGTLAEGQSWLAGDANRQRGEFVLVVEGAPAASGEADDTAHDALLRLLL
EEVPVKSAAKLAAALTGASRNTLYARALVLKEGKED

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=48.1481481481481, Blast_Score=224, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29002; Mature: 29002

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATPIGNTADITLRALHVLGLADRIAAEDTRNTGQLLARYGISKPLVAVHEHNEREAAQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCHHHHHH
RVIELLRGGERVAYVSDAGTPGISDPGARLVDAVRAAGFTVVPLPGASAAVTALSVAGDW
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCH
AGAFTFAGFLPPKAKQRATALQALVSHPYALVFYEAPHRIAETVAALAEAFGPARRLLIA
HHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RELTKLHEQLFQGTLAEGQSWLAGDANRQRGEFVLVVEGAPAASGEADDTAHDALLRLLL
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
EEVPVKSAAKLAAALTGASRNTLYARALVLKEGKED
HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVATPIGNTADITLRALHVLGLADRIAAEDTRNTGQLLARYGISKPLVAVHEHNEREAAQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCHHHHHH
RVIELLRGGERVAYVSDAGTPGISDPGARLVDAVRAAGFTVVPLPGASAAVTALSVAGDW
HHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCH
AGAFTFAGFLPPKAKQRATALQALVSHPYALVFYEAPHRIAETVAALAEAFGPARRLLIA
HHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
RELTKLHEQLFQGTLAEGQSWLAGDANRQRGEFVLVVEGAPAASGEADDTAHDALLRLLL
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
EEVPVKSAAKLAAALTGASRNTLYARALVLKEGKED
HHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]