| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mosC [H]
Identifier: 116688303
GI number: 116688303
Start: 322037
End: 323254
Strand: Reverse
Name: mosC [H]
Synonym: Bcen2424_0279
Alternate gene names: 116688303
Gene position: 323254-322037 (Counterclockwise)
Preceding gene: 116688307
Following gene: 116688300
Centisome position: 9.28
GC content: 72.74
Gene sequence:
>1218_bases GTGTCCCAATCCTCTTCCCCCGAATCGTCGTCCCCGTTCGCCGCGCCGCCCGACGCGCATCGCGTCCTGCCGCTGCCGGC CCGCCAGCGCGCACGCACGGCGTCGATGGCGCTGTTCTTCGTCGCCGGCATGATGTACGCGTCGTGGGGCGTGCACGTGC CGACCGTGCGCGACAAGTTCGCGCTGAGCCCCGGGCTGCTGTCGATCGCGCTATTCGCGGTCGCCGGCGGGTCGATCGTC GCGATGCTGAGCATCGCGCGCTGGATCGCGCGCGTCGGCTCGCGCACCGCGTGCCTCGCCGGCGGCCTCGTGATGTCCGC GTGCGCGGCGCTGATCCTCGTCGTGCCCGACTACTGGATGCTGCTCGCGGTGCTCGCGCTGTTCGGCTTCTCGATGGCGA CGCTCGACGTCGCGATGAATGCCGAGGCCAGCGCGGTCGAAATCGCGCTCGGCAAACCGATCATGTCGTCGCTGCACGGG ATGTTCAGCATCGGCGGGATGGCCGGCGCTGCGGCCGGCGGCGCGCTGCTGTCGGCCGGCATGGCGCCGGCCGCGCATCT CGCGCTCGCGGCGGCGGTGGGCGCCGCGGTGCTCGTGGCCGCGAGCCCGGCCGTGCTGCCGCACGTGCCGCATCACGAAC AGGCGCACGGCGGCGGCAACCGCTGGCGCTCGCCCGCGTTGTGGATGCTCGGCGGCATCGCGCTGATCGCACTGATCGCC GAAGGCGCGATGTACGACTGGGCGACGGTCTACATGCGCGACGTGGTCGCGGCGAGCCCCGCGCTCGCGAGTGCCGCGTA TGCGGCGTTCTCGGGCGGGATGGCCATCGCGCGCTTCGCGGGCGACGCCGTGCGCGCGCGCTTCGGCGCGCCGCAGCTCG TGTTCGCGAGCGCGTCGCTCGCCTGCGCGGGGATGATCGGCGCGCTGCTGCTGCCGTATCCGGCCGCGGTGCTGACCGGT TTCACGCTGATGGGCCTCGGGCTGGCCAACATGATGCCCGTGCTGTTCGCGGCCGCGGCGCGCGTGAAAGGCATTCACGC GGCCGAAGGGCTCGCGCACGTGGCCGGGCTCGCGTATTTCGGACTGCTGTTCGGTCCGGTCGCGATCGGCGCGGTCGCGC AGGCGTCGAACCTGACGATCGGCCTGTCGGTCGTCGCGCTGTGCGCGGCGCTCGTCGCACTCGTCGCGCCGAAGGTGCTC GCGCATCTGAAGATCTGA
Upstream 100 bases:
>100_bases CGAACGGCCGGCGCGCGGCAGGAACGTAAGCGGTTCGATAGAATCGGACCCATCCGACGGGCGCCGCGTGCGCCCGTGCA TTTTCCTGACGAGCCTTCCC
Downstream 100 bases:
>100_bases CGGCGCGGCCGCGCGCGCCGGCCCAAAAAGAAAGCGCGCATGCGTTGCCGCATGCGCGCTTTCACCCTCCTGTCGACCGC TTGTCGATCGCGCGTCGCGT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSQSSSPESSSPFAAPPDAHRVLPLPARQRARTASMALFFVAGMMYASWGVHVPTVRDKFALSPGLLSIALFAVAGGSIV AMLSIARWIARVGSRTACLAGGLVMSACAALILVVPDYWMLLAVLALFGFSMATLDVAMNAEASAVEIALGKPIMSSLHG MFSIGGMAGAAAGGALLSAGMAPAAHLALAAAVGAAVLVAASPAVLPHVPHHEQAHGGGNRWRSPALWMLGGIALIALIA EGAMYDWATVYMRDVVAASPALASAAYAAFSGGMAIARFAGDAVRARFGAPQLVFASASLACAGMIGALLLPYPAAVLTG FTLMGLGLANMMPVLFAAAARVKGIHAAEGLAHVAGLAYFGLLFGPVAIGAVAQASNLTIGLSVVALCAALVALVAPKVL AHLKI
Sequences:
>Translated_405_residues MSQSSSPESSSPFAAPPDAHRVLPLPARQRARTASMALFFVAGMMYASWGVHVPTVRDKFALSPGLLSIALFAVAGGSIV AMLSIARWIARVGSRTACLAGGLVMSACAALILVVPDYWMLLAVLALFGFSMATLDVAMNAEASAVEIALGKPIMSSLHG MFSIGGMAGAAAGGALLSAGMAPAAHLALAAAVGAAVLVAASPAVLPHVPHHEQAHGGGNRWRSPALWMLGGIALIALIA EGAMYDWATVYMRDVVAASPALASAAYAAFSGGMAIARFAGDAVRARFGAPQLVFASASLACAGMIGALLLPYPAAVLTG FTLMGLGLANMMPVLFAAAARVKGIHAAEGLAHVAGLAYFGLLFGPVAIGAVAQASNLTIGLSVVALCAALVALVAPKVL AHLKI >Mature_404_residues SQSSSPESSSPFAAPPDAHRVLPLPARQRARTASMALFFVAGMMYASWGVHVPTVRDKFALSPGLLSIALFAVAGGSIVA MLSIARWIARVGSRTACLAGGLVMSACAALILVVPDYWMLLAVLALFGFSMATLDVAMNAEASAVEIALGKPIMSSLHGM FSIGGMAGAAAGGALLSAGMAPAAHLALAAAVGAAVLVAASPAVLPHVPHHEQAHGGGNRWRSPALWMLGGIALIALIAE GAMYDWATVYMRDVVAASPALASAAYAAFSGGMAIARFAGDAVRARFGAPQLVFASASLACAGMIGALLLPYPAAVLTGF TLMGLGLANMMPVLFAAAARVKGIHAAEGLAHVAGLAYFGLLFGPVAIGAVAQASNLTIGLSVVALCAALVALVAPKVLA HLKI
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=377, Percent_Identity=31.5649867374005, Blast_Score=122, Evalue=5e-29,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40727; Mature: 40596
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSSPESSSPFAAPPDAHRVLPLPARQRARTASMALFFVAGMMYASWGVHVPTVRDKF CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ALSPGLLSIALFAVAGGSIVAMLSIARWIARVGSRTACLAGGLVMSACAALILVVPDYWM CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH LLAVLALFGFSMATLDVAMNAEASAVEIALGKPIMSSLHGMFSIGGMAGAAAGGALLSAG HHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC MAPAAHLALAAAVGAAVLVAASPAVLPHVPHHEQAHGGGNRWRSPALWMLGGIALIALIA CCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EGAMYDWATVYMRDVVAASPALASAAYAAFSGGMAIARFAGDAVRARFGAPQLVFASASL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ACAGMIGALLLPYPAAVLTGFTLMGLGLANMMPVLFAAAARVKGIHAAEGLAHVAGLAYF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLLFGPVAIGAVAQASNLTIGLSVVALCAALVALVAPKVLAHLKI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQSSSPESSSPFAAPPDAHRVLPLPARQRARTASMALFFVAGMMYASWGVHVPTVRDKF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH ALSPGLLSIALFAVAGGSIVAMLSIARWIARVGSRTACLAGGLVMSACAALILVVPDYWM CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH LLAVLALFGFSMATLDVAMNAEASAVEIALGKPIMSSLHGMFSIGGMAGAAAGGALLSAG HHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC MAPAAHLALAAAVGAAVLVAASPAVLPHVPHHEQAHGGGNRWRSPALWMLGGIALIALIA CCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EGAMYDWATVYMRDVVAASPALASAAYAAFSGGMAIARFAGDAVRARFGAPQLVFASASL CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ACAGMIGALLLPYPAAVLTGFTLMGLGLANMMPVLFAAAARVKGIHAAEGLAHVAGLAYF HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GLLFGPVAIGAVAQASNLTIGLSVVALCAALVALVAPKVLAHLKI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]