Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116688301

Identifier: 116688301

GI number: 116688301

Start: 319276

End: 320358

Strand: Direct

Name: 116688301

Synonym: Bcen2424_0277

Alternate gene names: NA

Gene position: 319276-320358 (Clockwise)

Preceding gene: 116688298

Following gene: 116688302

Centisome position: 9.16

GC content: 74.42

Gene sequence:

>1083_bases
ATGTCCGCCCGCTCGTTTTCCACGCCCTTTTCCGAACGCTTCGGCCTGCGTCTGCCGCTCGTGCAGGCGCCGATGGTCGG
CGCGACCACGACCGCGATGGCCGCCGCCGCATCGAATGCCGGTGCGCTCGGCAGCTTCGGCGCCGGCGCGCTCGCGCCCG
AGCGTATCGAAGCCGAAGTCGCCGCGATCCGCGCGGCGACCGATCGCCCGTTCGCGATCAACCTGTTCGTGTTGCCCGAT
GACGCCGCGCCGGACGCGGCGACCGTCGCGCGCGCACTCGCGGCGATCGACCCGCTGAACGCCGCGCTCGGCCTGCCGCC
GGGCACGGCGCCCGCGCGCTACGCGCCCGATTTCCGCGCGCAGCTCGATGCACTCGTCGCGCTGCGCGTGCCGGTCGCGA
GCTTCACGTTCGGCGTGCTCGACGCGGCCGACGTCGCCCGTCTGAAAGCCGCCGGCACGTATGTGATCGGCACCGCGACG
CACGTCGCCGAAGGGCTCGCGTGGCAGGCGGCCGGCGCCGATGCGATCTCCGCGCAGGGCGCCGAGGCCGGCGGCCATCG
CGGCACCTTCATCGGTGCCGCCGAGGACGCGCTGATCGGCACGTTCGCGCTCGTCCCGCAGCTCGTCGACGCGACCGGCC
TGCCCGTGCTGGCCGCGGGCGGCATCATGGACGGCCGCGGCATCGCGGCCGCACTGGCGCTCGGCGCGCAGGGCGCACAG
CTCGGCACCGCGTTCCTCACGTGCGCGGAAAGCGCGATCGCCGCGGACTGGAAGGCACGCCTGCTCGCGAGCGCCGATAC
GTCGACGCAGGTCACGCGCGCGATCACCGGCCGTCATGCACGCGGGCTGCGCAATACGCTGATGGCGCGGCTCGGCGAGC
ACGTGGCCGACGTCCCGCCGTATCCGGTGCAGAACGCGCTGACCCAGCCGTTGCGCCAGGCCGCCGCGCGCGCGAACGAT
GGCGACTACCTGTCGCTGTGGGCCGGCCAGGGCGCGCCGCTCGCGCGGCGGCGCGGCGATGCGTTGACGACGTCGCAACT
GGTCGCCGCGCTCGATGCGGAATGGCGCGCATCGGCTGCTTGA

Upstream 100 bases:

>100_bases
CGATCTCGATTATTCATTTTTCGGCGCCGTGCCGCTTCGATAGAGTCGATGTGTCGGCCTTTACAAAGCGCTTTCGCGCA
TCGTCATCGAAGGATTCGCC

Downstream 100 bases:

>100_bases
ACGCTGCTTCAACCGCTGGAATCATTGATATCCAACGACGAAACGCGCGTGCTGTCACGCGCGTTTCATTCAATGATCGC
GGGCACAAAATACCGAATCG

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSARSFSTPFSERFGLRLPLVQAPMVGATTTAMAAAASNAGALGSFGAGALAPERIEAEVAAIRAATDRPFAINLFVLPD
DAAPDAATVARALAAIDPLNAALGLPPGTAPARYAPDFRAQLDALVALRVPVASFTFGVLDAADVARLKAAGTYVIGTAT
HVAEGLAWQAAGADAISAQGAEAGGHRGTFIGAAEDALIGTFALVPQLVDATGLPVLAAGGIMDGRGIAAALALGAQGAQ
LGTAFLTCAESAIAADWKARLLASADTSTQVTRAITGRHARGLRNTLMARLGEHVADVPPYPVQNALTQPLRQAAARAND
GDYLSLWAGQGAPLARRRGDALTTSQLVAALDAEWRASAA

Sequences:

>Translated_360_residues
MSARSFSTPFSERFGLRLPLVQAPMVGATTTAMAAAASNAGALGSFGAGALAPERIEAEVAAIRAATDRPFAINLFVLPD
DAAPDAATVARALAAIDPLNAALGLPPGTAPARYAPDFRAQLDALVALRVPVASFTFGVLDAADVARLKAAGTYVIGTAT
HVAEGLAWQAAGADAISAQGAEAGGHRGTFIGAAEDALIGTFALVPQLVDATGLPVLAAGGIMDGRGIAAALALGAQGAQ
LGTAFLTCAESAIAADWKARLLASADTSTQVTRAITGRHARGLRNTLMARLGEHVADVPPYPVQNALTQPLRQAAARAND
GDYLSLWAGQGAPLARRRGDALTTSQLVAALDAEWRASAA
>Mature_359_residues
SARSFSTPFSERFGLRLPLVQAPMVGATTTAMAAAASNAGALGSFGAGALAPERIEAEVAAIRAATDRPFAINLFVLPDD
AAPDAATVARALAAIDPLNAALGLPPGTAPARYAPDFRAQLDALVALRVPVASFTFGVLDAADVARLKAAGTYVIGTATH
VAEGLAWQAAGADAISAQGAEAGGHRGTFIGAAEDALIGTFALVPQLVDATGLPVLAAGGIMDGRGIAAALALGAQGAQL
GTAFLTCAESAIAADWKARLLASADTSTQVTRAITGRHARGLRNTLMARLGEHVADVPPYPVQNALTQPLRQAAARANDG
DYLSLWAGQGAPLARRRGDALTTSQLVAALDAEWRASAA

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=365, Percent_Identity=29.8630136986301, Blast_Score=113, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 36344; Mature: 36212

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARSFSTPFSERFGLRLPLVQAPMVGATTTAMAAAASNAGALGSFGAGALAPERIEAEV
CCCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
AAIRAATDRPFAINLFVLPDDAAPDAATVARALAAIDPLNAALGLPPGTAPARYAPDFRA
HHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHH
QLDALVALRVPVASFTFGVLDAADVARLKAAGTYVIGTATHVAEGLAWQAAGADAISAQG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCEEECCCCCHHHCCC
AEAGGHRGTFIGAAEDALIGTFALVPQLVDATGLPVLAAGGIMDGRGIAAALALGAQGAQ
CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCHH
LGTAFLTCAESAIAADWKARLLASADTSTQVTRAITGRHARGLRNTLMARLGEHVADVPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YPVQNALTQPLRQAAARANDGDYLSLWAGQGAPLARRRGDALTTSQLVAALDAEWRASAA
CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
SARSFSTPFSERFGLRLPLVQAPMVGATTTAMAAAASNAGALGSFGAGALAPERIEAEV
CCCCCCCCHHHHCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
AAIRAATDRPFAINLFVLPDDAAPDAATVARALAAIDPLNAALGLPPGTAPARYAPDFRA
HHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHH
QLDALVALRVPVASFTFGVLDAADVARLKAAGTYVIGTATHVAEGLAWQAAGADAISAQG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHCCEEECCCCCHHHCCC
AEAGGHRGTFIGAAEDALIGTFALVPQLVDATGLPVLAAGGIMDGRGIAAALALGAQGAQ
CCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCCHH
LGTAFLTCAESAIAADWKARLLASADTSTQVTRAITGRHARGLRNTLMARLGEHVADVPP
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YPVQNALTQPLRQAAARANDGDYLSLWAGQGAPLARRRGDALTTSQLVAALDAEWRASAA
CCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA