| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688254
Identifier: 116688254
GI number: 116688254
Start: 266095
End: 266481
Strand: Reverse
Name: 116688254
Synonym: Bcen2424_0230
Alternate gene names: NA
Gene position: 266481-266095 (Counterclockwise)
Preceding gene: 116688258
Following gene: 116688250
Centisome position: 7.65
GC content: 54.52
Gene sequence:
>387_bases ATGATGAAAAAACGCCGCTCCACCCGAGCAACTGCCCAGTTGCTTGCAATCAACGCCAAGCTGTACGAGAAGGAGCGCGA CCGCCAAGTTACGCGCTACCGCTTTTCAGCCAACACCCTTCGCCGTCTGGCGAACCGCACCGCGATACGTGAGAGCTTTC TGAATGAACTCGAAGAGGAACTAGCCGAGCTGAACTTGCTGCTCGTGCGCCTTCCGGGCGAGTACGCTGTCGTTGACCTA TCCAAAGCTGACTCATGGGTCAAGCTGGGCTTTAAGCGTTTGAAGGAAGCTGACGACGACCTCTTGGCTGCTAGCGAAGA ACACATCGAAATGAAGTATGAGCAGTTGTATCCCGCTGCTAATGAGGAAGAAACGGGCGACGACTAA
Upstream 100 bases:
>100_bases CAGCCAAATTGACACCGAATCCGGTGCCATATACAATTCACCCGCAGTCGCAGTTCAGCCTTGAAAGGCACCTCTACTTT CCTCTCCTAATTAGGATTCG
Downstream 100 bases:
>100_bases GTAGTAGCCGCCGAAGAAGAGCAGCGTGAGTACTCGCTGCTCTTCCCACCGGCCTTGCCGCACGGTCCCCGATGCATAGC GCTTGCCCTTCTGATGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MMKKRRSTRATAQLLAINAKLYEKERDRQVTRYRFSANTLRRLANRTAIRESFLNELEEELAELNLLLVRLPGEYAVVDL SKADSWVKLGFKRLKEADDDLLAASEEHIEMKYEQLYPAANEEETGDD
Sequences:
>Translated_128_residues MMKKRRSTRATAQLLAINAKLYEKERDRQVTRYRFSANTLRRLANRTAIRESFLNELEEELAELNLLLVRLPGEYAVVDL SKADSWVKLGFKRLKEADDDLLAASEEHIEMKYEQLYPAANEEETGDD >Mature_128_residues MMKKRRSTRATAQLLAINAKLYEKERDRQVTRYRFSANTLRRLANRTAIRESFLNELEEELAELNLLLVRLPGEYAVVDL SKADSWVKLGFKRLKEADDDLLAASEEHIEMKYEQLYPAANEEETGDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14907; Mature: 14907
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKRRSTRATAQLLAINAKLYEKERDRQVTRYRFSANTLRRLANRTAIRESFLNELEEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELNLLLVRLPGEYAVVDLSKADSWVKLGFKRLKEADDDLLAASEEHIEMKYEQLYPAA HHHHHEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCC NEEETGDD CCCCCCCC >Mature Secondary Structure MMKKRRSTRATAQLLAINAKLYEKERDRQVTRYRFSANTLRRLANRTAIRESFLNELEEE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAELNLLLVRLPGEYAVVDLSKADSWVKLGFKRLKEADDDLLAASEEHIEMKYEQLYPAA HHHHHEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCC NEEETGDD CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA