| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116688211
Identifier: 116688211
GI number: 116688211
Start: 209831
End: 210478
Strand: Direct
Name: 116688211
Synonym: Bcen2424_0187
Alternate gene names: NA
Gene position: 209831-210478 (Clockwise)
Preceding gene: 116688210
Following gene: 116688212
Centisome position: 6.02
GC content: 57.87
Gene sequence:
>648_bases ATGCAGCGGTTGACGTTTTCCCGAGTTTGCACATTTATAAGGCCCGCACCAATGAATTTGCCGCTTCCGGAAGTTTTTCA CTCTGCCCTGCAGGGCGACCGTCTCGAAATCATCGCGAACATCCTGATCGACGAGCATTTCACGACGCTAACCGACCTCC AAAGCGAGTTTGACGACGGCTATTCGCGCGGGACGACGCGCTTCGCCCGTCAGAAAAACCGCCTCAAGTCGGTGGCGCTG TCGGGTCAATACGACTGGCTGCAGCTGCTGCATGCCGGCAATGACCTCGTTTTCACGATCGAGGGTATTCCGTGCAGGTT TGCGACTGACGATCCGGTGAACCCGACCAAGCCGGCGGTTCTCGATGCGACGCCGATCCAGCAGTCTTTTTTCGATGAGG TGGAGAACGGCGAACCGTGCAAGTTCTGCTTCATTCTTGACGGTGGCTATGCCGAAGCGGACGACCCGCGAGTCGTGTTT ATCGGTGAGGATTTGATGGGGGTTGCGAAGTGTCGCTGGACGTCGGACGGGACTAAGGCGCTTCACGCGGTTTCTGCCAA TACCCCGCCGGCGAAAGACATCGGTAAGGCCCCGGTGGGTCCCAAGCGGATCGACTCTGACAAGACTGGAACGTCTGACG CACCATGA
Upstream 100 bases:
>100_bases CATGCAAGTATGCAGCCGGCGGGGTAGGTTTGCTGCGGCGACGCGGGTGAAGCTCGATAGCGTTAATTTTCAGTTGACGG ATCGCGGGATTTGCACAAAA
Downstream 100 bases:
>100_bases TTTTTATTGGTTCGAACCTGCGGATCGCGCGGCTATTTCATAACTTCTCGCAACAAGAGCTGGGCGAGCACATTGGTTGT TCCAAGCAGTTTCTCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MQRLTFSRVCTFIRPAPMNLPLPEVFHSALQGDRLEIIANILIDEHFTTLTDLQSEFDDGYSRGTTRFARQKNRLKSVAL SGQYDWLQLLHAGNDLVFTIEGIPCRFATDDPVNPTKPAVLDATPIQQSFFDEVENGEPCKFCFILDGGYAEADDPRVVF IGEDLMGVAKCRWTSDGTKALHAVSANTPPAKDIGKAPVGPKRIDSDKTGTSDAP
Sequences:
>Translated_215_residues MQRLTFSRVCTFIRPAPMNLPLPEVFHSALQGDRLEIIANILIDEHFTTLTDLQSEFDDGYSRGTTRFARQKNRLKSVAL SGQYDWLQLLHAGNDLVFTIEGIPCRFATDDPVNPTKPAVLDATPIQQSFFDEVENGEPCKFCFILDGGYAEADDPRVVF IGEDLMGVAKCRWTSDGTKALHAVSANTPPAKDIGKAPVGPKRIDSDKTGTSDAP >Mature_215_residues MQRLTFSRVCTFIRPAPMNLPLPEVFHSALQGDRLEIIANILIDEHFTTLTDLQSEFDDGYSRGTTRFARQKNRLKSVAL SGQYDWLQLLHAGNDLVFTIEGIPCRFATDDPVNPTKPAVLDATPIQQSFFDEVENGEPCKFCFILDGGYAEADDPRVVF IGEDLMGVAKCRWTSDGTKALHAVSANTPPAKDIGKAPVGPKRIDSDKTGTSDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23673; Mature: 23673
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLTFSRVCTFIRPAPMNLPLPEVFHSALQGDRLEIIANILIDEHFTTLTDLQSEFDDG CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC YSRGTTRFARQKNRLKSVALSGQYDWLQLLHAGNDLVFTIEGIPCRFATDDPVNPTKPAV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCE LDATPIQQSFFDEVENGEPCKFCFILDGGYAEADDPRVVFIGEDLMGVAKCRWTSDGTKA EECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHEEECCCCCCE LHAVSANTPPAKDIGKAPVGPKRIDSDKTGTSDAP EEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQRLTFSRVCTFIRPAPMNLPLPEVFHSALQGDRLEIIANILIDEHFTTLTDLQSEFDDG CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC YSRGTTRFARQKNRLKSVALSGQYDWLQLLHAGNDLVFTIEGIPCRFATDDPVNPTKPAV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCE LDATPIQQSFFDEVENGEPCKFCFILDGGYAEADDPRVVFIGEDLMGVAKCRWTSDGTKA EECCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHEEECCCCCCE LHAVSANTPPAKDIGKAPVGPKRIDSDKTGTSDAP EEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA