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The map label for this gene is ytfH [C]

Identifier: 116688207

GI number: 116688207

Start: 203608

End: 204030

Strand: Reverse

Name: ytfH [C]

Synonym: Bcen2424_0183

Alternate gene names: 116688207

Gene position: 204030-203608 (Counterclockwise)

Preceding gene: 116688216

Following gene: 116688202

Centisome position: 5.86

GC content: 60.28

Gene sequence:

>423_bases
TTGGATCGAGACGAACTTCTCCAATATTCGCAAACCGTTTGCGACGGCCTGCGAGACGATGATGACGGACTGCGGCGAGA
GGTGCTCGCACACGCCGGGAGTCGTTGGTCGCTCGGTGTCGTCCACACGCTTGGCGTGTACGGCAGGCTGCGCCATGCCG
AAATCGGCAGGCGCATGCACGGGGTGACTCAGCGGATGTTGACGCGCACGTTACGACAACTCGAACGTGACGGTCTGGTG
CTCCGTCACGATTTCGATGAAGTGCCCCCTAGAGTCGAATACGAGTTATCCGACACGGGCATGGACCTGCTCGTTCGCAT
GGTCCCGTTGTGGACCTGGATTGTCGAGAATGCGGACCGCTTCAGAGAAGCGAGGCGGATTTTCGACAGCCAGAACCGCG
ACGCGAGCGACGCGAACTCGTAG

Upstream 100 bases:

>100_bases
TGGTTCATCGTCTAGCCTGCTGAGAAATGTGTTGCGGCAGTCTAGCAATGCATGGACGTGTATGAAAGAAGGCACATGCG
TGATACTGGGAGCCAGATAG

Downstream 100 bases:

>100_bases
CTTGCCGATTGTTGATTTGCATTCCCTGCTTCCCTGGCGGGGATAAGGATTGACGCCTCTGAGTGAAAGGCTTATGGCGG
CCGCGCATTTCTTACTTCGT

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDRDELLQYSQTVCDGLRDDDDGLRREVLAHAGSRWSLGVVHTLGVYGRLRHAEIGRRMHGVTQRMLTRTLRQLERDGLV
LRHDFDEVPPRVEYELSDTGMDLLVRMVPLWTWIVENADRFREARRIFDSQNRDASDANS

Sequences:

>Translated_140_residues
MDRDELLQYSQTVCDGLRDDDDGLRREVLAHAGSRWSLGVVHTLGVYGRLRHAEIGRRMHGVTQRMLTRTLRQLERDGLV
LRHDFDEVPPRVEYELSDTGMDLLVRMVPLWTWIVENADRFREARRIFDSQNRDASDANS
>Mature_140_residues
MDRDELLQYSQTVCDGLRDDDDGLRREVLAHAGSRWSLGVVHTLGVYGRLRHAEIGRRMHGVTQRMLTRTLRQLERDGLV
LRHDFDEVPPRVEYELSDTGMDLLVRMVPLWTWIVENADRFREARRIFDSQNRDASDANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=108, Percent_Identity=34.2592592592593, Blast_Score=63, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16349; Mature: 16349

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRDELLQYSQTVCDGLRDDDDGLRREVLAHAGSRWSLGVVHTLGVYGRLRHAEIGRRMH
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVTQRMLTRTLRQLERDGLVLRHDFDEVPPRVEYELSDTGMDLLVRMVPLWTWIVENADR
HHHHHHHHHHHHHHHHCCEEEECCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FREARRIFDSQNRDASDANS
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDRDELLQYSQTVCDGLRDDDDGLRREVLAHAGSRWSLGVVHTLGVYGRLRHAEIGRRMH
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVTQRMLTRTLRQLERDGLVLRHDFDEVPPRVEYELSDTGMDLLVRMVPLWTWIVENADR
HHHHHHHHHHHHHHHHCCEEEECCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
FREARRIFDSQNRDASDANS
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]