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The map label for this gene is 116688202

Identifier: 116688202

GI number: 116688202

Start: 196752

End: 197471

Strand: Reverse

Name: 116688202

Synonym: Bcen2424_0178

Alternate gene names: NA

Gene position: 197471-196752 (Counterclockwise)

Preceding gene: 116688207

Following gene: 116688195

Centisome position: 5.67

GC content: 62.5

Gene sequence:

>720_bases
ATGAAGAAGCGTTCCTCACAGGCAACTTATGCCGCCGCGGGCACCGCCGCTGACACTGTCTTGACGATCAGGGATCTCGC
GCTCGAACCGCATCTCGATGAGGTCAGTGCAAACCTTGGACTGCGGGAGCGAAACAAGCTGGAAAAGGCGTTTCTGATCC
GGCAGGCCGCGCGCGAACTGTTCCTGGCGAAAGGCTACGAAGCCACCACGCTGCGCGAGGTCGCCAAGCGTGCGGACGTC
GGCTTCGGCACTGTCTTCTCGTATGCAGTCGACAAGCCAGGTCTGCTGGCCATGGTGTTCGTCGAGGACCTCCAGCATCT
GCCGCCGTTGTTTGACGTGCCAGGCGCCGCGCCTCTTGTCGATCAGGCCGTTGCCGCCTTCATGAAGCTTTACGAGTTCT
GGGCGCGCACGCCGGTGCTGAGTCGCGCGGTGCTCCCGCAAATGGAGTTTTACCGCTCCAATCCTTTCACCGACGCAATC
GCCGAGCGCCGGCAGGAACTGAAGACCAACCTCGCGCGCTGGCTGACGGCGTGCGCACAACAGAAGCGGATCGCGGCCAA
GGTCGATCCGAGTGTGGCGGCCGACACGATTTTCGCGATCTACACATCCGCATTGCGCGAGTGGATCGTGTCGGACCCGC
TCGACCTTTCGGCTGGCGCGGAACAACTCGCGCGCTTGCTCGACCTGCCGTTTCGAGCGATCGAGAAGAAAGGCCGCTGA

Upstream 100 bases:

>100_bases
TCGAAGGCCGTTAGCGCTTTTCAAGTCGAACAATTGCAACCAAAATAGAGCGTGATCGATTTTGTGATCCTTTCCTCACG
TCCTCAACCTGGGTGTATGC

Downstream 100 bases:

>100_bases
CGCGACAGCCCTGCGCGAACGGTTTGTCATGTCAACATCCCTTCCAATGCGGTGTGCGTTTCTCGGCGAACGCCCTTGGC
CCTTCAAGGGCATCTTCGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKRSSQATYAAAGTAADTVLTIRDLALEPHLDEVSANLGLRERNKLEKAFLIRQAARELFLAKGYEATTLREVAKRADV
GFGTVFSYAVDKPGLLAMVFVEDLQHLPPLFDVPGAAPLVDQAVAAFMKLYEFWARTPVLSRAVLPQMEFYRSNPFTDAI
AERRQELKTNLARWLTACAQQKRIAAKVDPSVAADTIFAIYTSALREWIVSDPLDLSAGAEQLARLLDLPFRAIEKKGR

Sequences:

>Translated_239_residues
MKKRSSQATYAAAGTAADTVLTIRDLALEPHLDEVSANLGLRERNKLEKAFLIRQAARELFLAKGYEATTLREVAKRADV
GFGTVFSYAVDKPGLLAMVFVEDLQHLPPLFDVPGAAPLVDQAVAAFMKLYEFWARTPVLSRAVLPQMEFYRSNPFTDAI
AERRQELKTNLARWLTACAQQKRIAAKVDPSVAADTIFAIYTSALREWIVSDPLDLSAGAEQLARLLDLPFRAIEKKGR
>Mature_239_residues
MKKRSSQATYAAAGTAADTVLTIRDLALEPHLDEVSANLGLRERNKLEKAFLIRQAARELFLAKGYEATTLREVAKRADV
GFGTVFSYAVDKPGLLAMVFVEDLQHLPPLFDVPGAAPLVDQAVAAFMKLYEFWARTPVLSRAVLPQMEFYRSNPFTDAI
AERRQELKTNLARWLTACAQQKRIAAKVDPSVAADTIFAIYTSALREWIVSDPLDLSAGAEQLARLLDLPFRAIEKKGR

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26538; Mature: 26538

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRSSQATYAAAGTAADTVLTIRDLALEPHLDEVSANLGLRERNKLEKAFLIRQAAREL
CCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLAKGYEATTLREVAKRADVGFGTVFSYAVDKPGLLAMVFVEDLQHLPPLFDVPGAAPLV
HHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
DQAVAAFMKLYEFWARTPVLSRAVLPQMEFYRSNPFTDAIAERRQELKTNLARWLTACAQ
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKRIAAKVDPSVAADTIFAIYTSALREWIVSDPLDLSAGAEQLARLLDLPFRAIEKKGR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MKKRSSQATYAAAGTAADTVLTIRDLALEPHLDEVSANLGLRERNKLEKAFLIRQAAREL
CCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FLAKGYEATTLREVAKRADVGFGTVFSYAVDKPGLLAMVFVEDLQHLPPLFDVPGAAPLV
HHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
DQAVAAFMKLYEFWARTPVLSRAVLPQMEFYRSNPFTDAIAERRQELKTNLARWLTACAQ
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QKRIAAKVDPSVAADTIFAIYTSALREWIVSDPLDLSAGAEQLARLLDLPFRAIEKKGR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA