| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is dhbE [H]
Identifier: 116688199
GI number: 116688199
Start: 193504
End: 195177
Strand: Direct
Name: dhbE [H]
Synonym: Bcen2424_0175
Alternate gene names: 116688199
Gene position: 193504-195177 (Clockwise)
Preceding gene: 116688198
Following gene: 116688200
Centisome position: 5.55
GC content: 60.51
Gene sequence:
>1674_bases ATGACCGCCTCATCCCATGCCTCTCGCGACGTGTTCGACGGCGTGACGCCGTTTCCCGCCGACTACGCCGCCCGTTACCG TGCGAAAGGTTATTGGCAGGACAAGCCGATGCGCCAGGTTTTCGGCGAATGGTGCCAGGCGCACGCGCCCAAAATCGCCT TGCGCGACGCGACGCGCAGTGTGACTTTCGCGGAACTCGACGCGGCATCGACCAATCTCGCGCTTAACCTGCTTGATGTA GGCATTCTTCCGGGCGACAAGCTCGTCGTGCAGTTGCCGAACGTCATCGAATTCGTGTATTTGCACTTTGCGTTGCAGAA GATCGGCGCGATACCGGTGCTTGCGCTGCCGCCGCATCGCTACCGCGAGATCAGCTGCTTCGTCGAGATGGCGGAAGCGG TCGCGCTCATCACGCCCGACGCACAAGGCGATTTCAGATACACGCAGATGACGGAACGCCTGCGCAACGAGGCACCGCGT CTTCGCTTCGGCATCGTGTTAGGAGACGCACCCGAGGGCTTTGTCTCGCTACGCGACCTGATCGAGCGTCCTCCGGCACG CGATGCGAGCGAACTGGACAACATCGCAATCGACCCATGCTCGCCGGCTCTCTTCTTGCTGTCCGGCGGCACCACCGGCA TTCCCAAGCTGATCCCGCGCACCCATAACGACTACGTGCTCAACTCGAAGCTGGCCGCGGCCGTCTGCGATATACGCGAC GGTGACGTCTTGCTCGATGTGCTCCCGATCGGTCACAACCTGCCGCTAGCGTGTCCCGGTCTGCAAGGTTTTCTGTCGCG CGGCTGCACTGTCGTGCTGCATACGAGTACGTCGTCCGACCAGATCTTTCCGCTTATCGACCGCTACAAGGTCACGCATA TCCATGTTGTGCCTGCACTGCTGATCCGCTGGCTGGAATCGCCGGTGATTGCGGACTTCGATCTCGGCTCGGTTCGGGTG ATTCAGAGCGGCGGCCAGCGCTTGCAGCCTGAAACGCGCAAACGCACCCAGCAGCGGTTGCCGCAATGCTTCGTGCAGGA GAACTTCGGCATGGCCGAGGGCGTGCTGATGTTCGTGCGTGCCGACGATCCGCTCGAAGTGCGCATGGAAACCGTCGGGC GACCCGTTTGCGAAGACGACGAAGTCATGCTACTCGGTGAGGACGATCAGCCGGTACAGCCTGGCGAAGTGGGCGAACTG TGCTGCCGCGGTCCGTACACTTTGCGCGGTTACTACCGTGCGCCCGAGCACAACGCACGCGCGTTCACGTCCGACGGCTT TTATCGCAGCGGCGACCTCATGAGGCAACATCCGTCGGGCAACTACATTGTTGAAGGACGCAAGAAGGACCTGATCAATC GCGGCGCGGAAAAGATCAGTGCAGAAGAGATCGAGAACCTGATTCTTGCGCACCCGGCCGTGGTGAACGTTGCCTGCGTG GCGATGCCCGATCCGCTGATGGGAGAGCGCAATTGCGCGTGTCTGATTCTGCGTGAGGGCGTTTCATTGTCGCTCGACGA ACTCGTTGCATTCCTGAAAAATCAGGAGATCGCCAAGTTCAAGCTTCCCGAACGCGTTGAGATCTTCACGTCATTTCCGC TTTCGAATTTCGGTAAGGTCTCGAAGAAAGATCTGGCCGCAACGGTGGCCGAGCGCGTACAGGCGGCGCAATGA
Upstream 100 bases:
>100_bases GACGATGCGCTTCGTCGACGGTCAGGTGATCGTCATCGACGGCGGCTACAGCTCGATCACCTGATCGACGCGCCCCCTGC CCCCACTCAAGGAGACACTG
Downstream 100 bases:
>100_bases AATGCTATGTAACCGCAATCCACGAGAACGGGATCGCCACGCTCACGCTTGCCGATCCCGAGCGTCGTAATGTCCTTTCC GAGGTGCTTTGCGAACAGTT
Product: AMP-dependent synthetase and ligase
Products: diphosphate; (2,3-dihydroxybenzoyl)adenylate
Alternate protein names: Dihydroxybenzoic acid-activating enzyme [H]
Number of amino acids: Translated: 557; Mature: 556
Protein sequence:
>557_residues MTASSHASRDVFDGVTPFPADYAARYRAKGYWQDKPMRQVFGEWCQAHAPKIALRDATRSVTFAELDAASTNLALNLLDV GILPGDKLVVQLPNVIEFVYLHFALQKIGAIPVLALPPHRYREISCFVEMAEAVALITPDAQGDFRYTQMTERLRNEAPR LRFGIVLGDAPEGFVSLRDLIERPPARDASELDNIAIDPCSPALFLLSGGTTGIPKLIPRTHNDYVLNSKLAAAVCDIRD GDVLLDVLPIGHNLPLACPGLQGFLSRGCTVVLHTSTSSDQIFPLIDRYKVTHIHVVPALLIRWLESPVIADFDLGSVRV IQSGGQRLQPETRKRTQQRLPQCFVQENFGMAEGVLMFVRADDPLEVRMETVGRPVCEDDEVMLLGEDDQPVQPGEVGEL CCRGPYTLRGYYRAPEHNARAFTSDGFYRSGDLMRQHPSGNYIVEGRKKDLINRGAEKISAEEIENLILAHPAVVNVACV AMPDPLMGERNCACLILREGVSLSLDELVAFLKNQEIAKFKLPERVEIFTSFPLSNFGKVSKKDLAATVAERVQAAQ
Sequences:
>Translated_557_residues MTASSHASRDVFDGVTPFPADYAARYRAKGYWQDKPMRQVFGEWCQAHAPKIALRDATRSVTFAELDAASTNLALNLLDV GILPGDKLVVQLPNVIEFVYLHFALQKIGAIPVLALPPHRYREISCFVEMAEAVALITPDAQGDFRYTQMTERLRNEAPR LRFGIVLGDAPEGFVSLRDLIERPPARDASELDNIAIDPCSPALFLLSGGTTGIPKLIPRTHNDYVLNSKLAAAVCDIRD GDVLLDVLPIGHNLPLACPGLQGFLSRGCTVVLHTSTSSDQIFPLIDRYKVTHIHVVPALLIRWLESPVIADFDLGSVRV IQSGGQRLQPETRKRTQQRLPQCFVQENFGMAEGVLMFVRADDPLEVRMETVGRPVCEDDEVMLLGEDDQPVQPGEVGEL CCRGPYTLRGYYRAPEHNARAFTSDGFYRSGDLMRQHPSGNYIVEGRKKDLINRGAEKISAEEIENLILAHPAVVNVACV AMPDPLMGERNCACLILREGVSLSLDELVAFLKNQEIAKFKLPERVEIFTSFPLSNFGKVSKKDLAATVAERVQAAQ >Mature_556_residues TASSHASRDVFDGVTPFPADYAARYRAKGYWQDKPMRQVFGEWCQAHAPKIALRDATRSVTFAELDAASTNLALNLLDVG ILPGDKLVVQLPNVIEFVYLHFALQKIGAIPVLALPPHRYREISCFVEMAEAVALITPDAQGDFRYTQMTERLRNEAPRL RFGIVLGDAPEGFVSLRDLIERPPARDASELDNIAIDPCSPALFLLSGGTTGIPKLIPRTHNDYVLNSKLAAAVCDIRDG DVLLDVLPIGHNLPLACPGLQGFLSRGCTVVLHTSTSSDQIFPLIDRYKVTHIHVVPALLIRWLESPVIADFDLGSVRVI QSGGQRLQPETRKRTQQRLPQCFVQENFGMAEGVLMFVRADDPLEVRMETVGRPVCEDDEVMLLGEDDQPVQPGEVGELC CRGPYTLRGYYRAPEHNARAFTSDGFYRSGDLMRQHPSGNYIVEGRKKDLINRGAEKISAEEIENLILAHPAVVNVACVA MPDPLMGERNCACLILREGVSLSLDELVAFLKNQEIAKFKLPERVEIFTSFPLSNFGKVSKKDLAATVAERVQAAQ
Specific function: Activation of the carboxylate group of 2,3-dihydroxy- benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate [H]
COG id: COG1021
COG function: function code Q; Peptide arylation enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=508, Percent_Identity=25.3937007874016, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI187761345, Length=384, Percent_Identity=29.9479166666667, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI187761343, Length=384, Percent_Identity=29.9479166666667, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI38505220, Length=504, Percent_Identity=23.2142857142857, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI157311624, Length=504, Percent_Identity=23.4126984126984, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI157311622, Length=504, Percent_Identity=23.4126984126984, Blast_Score=110, Evalue=5e-24, Organism=Homo sapiens, GI58082049, Length=504, Percent_Identity=23.015873015873, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI115511026, Length=483, Percent_Identity=23.1884057971014, Blast_Score=107, Evalue=4e-23, Organism=Homo sapiens, GI28416953, Length=533, Percent_Identity=24.577861163227, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI227499619, Length=489, Percent_Identity=23.3128834355828, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI122937307, Length=504, Percent_Identity=23.015873015873, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI42544132, Length=496, Percent_Identity=21.3709677419355, Blast_Score=94, Evalue=5e-19, Organism=Homo sapiens, GI8923896, Length=546, Percent_Identity=23.2600732600733, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI253970489, Length=559, Percent_Identity=22.7191413237925, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1786810, Length=542, Percent_Identity=41.5129151291513, Blast_Score=390, Evalue=1e-109, Organism=Escherichia coli, GI145693145, Length=538, Percent_Identity=29.9256505576208, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI221142682, Length=522, Percent_Identity=26.6283524904215, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1788107, Length=552, Percent_Identity=23.9130434782609, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790505, Length=533, Percent_Identity=23.4521575984991, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1786529, Length=537, Percent_Identity=23.2774674115456, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1789201, Length=377, Percent_Identity=24.6684350132626, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1788595, Length=350, Percent_Identity=24.5714285714286, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71994703, Length=522, Percent_Identity=25.095785440613, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71994694, Length=522, Percent_Identity=25.095785440613, Blast_Score=139, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71994690, Length=522, Percent_Identity=25.095785440613, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17560308, Length=517, Percent_Identity=26.4990328820116, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17531443, Length=360, Percent_Identity=26.6666666666667, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI17557194, Length=548, Percent_Identity=25.3649635036496, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17538037, Length=540, Percent_Identity=25.1851851851852, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI32563687, Length=517, Percent_Identity=23.7911025145068, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17559526, Length=518, Percent_Identity=25.4826254826255, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17558820, Length=515, Percent_Identity=24.4660194174757, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71996755, Length=503, Percent_Identity=26.441351888668, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17560140, Length=358, Percent_Identity=24.5810055865922, Blast_Score=92, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71985884, Length=356, Percent_Identity=23.314606741573, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71983001, Length=537, Percent_Identity=23.463687150838, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI71982997, Length=537, Percent_Identity=23.463687150838, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI193209603, Length=271, Percent_Identity=23.2472324723247, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17556356, Length=339, Percent_Identity=22.7138643067847, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=354, Percent_Identity=30.225988700565, Blast_Score=147, Evalue=4e-36, Organism=Saccharomyces cerevisiae, GI6323903, Length=327, Percent_Identity=24.7706422018349, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581924, Length=515, Percent_Identity=26.0194174757282, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI18859661, Length=531, Percent_Identity=23.5404896421846, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI20130357, Length=410, Percent_Identity=25.609756097561, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI21356441, Length=379, Percent_Identity=25.8575197889182, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI21355181, Length=523, Percent_Identity=22.9445506692161, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI21358303, Length=379, Percent_Identity=23.2189973614776, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI281365686, Length=382, Percent_Identity=23.2984293193717, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24648253, Length=321, Percent_Identity=23.98753894081, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI19922652, Length=518, Percent_Identity=23.5521235521236, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI24648255, Length=321, Percent_Identity=24.2990654205607, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI21356947, Length=385, Percent_Identity=20.2597402597403, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648260, Length=389, Percent_Identity=23.9074550128535, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24653035, Length=384, Percent_Identity=21.6145833333333, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI161076582, Length=315, Percent_Identity=21.9047619047619, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR011963 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 2.7.7.58
Molecular weight: Translated: 61610; Mature: 61478
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASSHASRDVFDGVTPFPADYAARYRAKGYWQDKPMRQVFGEWCQAHAPKIALRDATRS CCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC VTFAELDAASTNLALNLLDVGILPGDKLVVQLPNVIEFVYLHFALQKIGAIPVLALPPHR EEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCHH YREISCFVEMAEAVALITPDAQGDFRYTQMTERLRNEAPRLRFGIVLGDAPEGFVSLRDL HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH IERPPARDASELDNIAIDPCSPALFLLSGGTTGIPKLIPRTHNDYVLNSKLAAAVCDIRD HCCCCCCCHHHHCCEEECCCCCEEEEEECCCCCCCHHCCCCCCCEEECCHHHHHEECCCC GDVLLDVLPIGHNLPLACPGLQGFLSRGCTVVLHTSTSSDQIFPLIDRYKVTHIHVVPAL CCEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHCEEEEEEHHHHHH LIRWLESPVIADFDLGSVRVIQSGGQRLQPETRKRTQQRLPQCFVQENFGMAEGVLMFVR HHHHHCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE ADDPLEVRMETVGRPVCEDDEVMLLGEDDQPVQPGEVGELCCRGPYTLRGYYRAPEHNAR CCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCC AFTSDGFYRSGDLMRQHPSGNYIVEGRKKDLINRGAEKISAEEIENLILAHPAVVNVACV EEECCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEEEE AMPDPLMGERNCACLILREGVSLSLDELVAFLKNQEIAKFKLPERVEIFTSFPLSNFGKV ECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCC SKKDLAATVAERVQAAQ HHHHHHHHHHHHHHCCC >Mature Secondary Structure TASSHASRDVFDGVTPFPADYAARYRAKGYWQDKPMRQVFGEWCQAHAPKIALRDATRS CCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC VTFAELDAASTNLALNLLDVGILPGDKLVVQLPNVIEFVYLHFALQKIGAIPVLALPPHR EEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCHH YREISCFVEMAEAVALITPDAQGDFRYTQMTERLRNEAPRLRFGIVLGDAPEGFVSLRDL HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH IERPPARDASELDNIAIDPCSPALFLLSGGTTGIPKLIPRTHNDYVLNSKLAAAVCDIRD HCCCCCCCHHHHCCEEECCCCCEEEEEECCCCCCCHHCCCCCCCEEECCHHHHHEECCCC GDVLLDVLPIGHNLPLACPGLQGFLSRGCTVVLHTSTSSDQIFPLIDRYKVTHIHVVPAL CCEEEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCHHHCEEEEEEHHHHHH LIRWLESPVIADFDLGSVRVIQSGGQRLQPETRKRTQQRLPQCFVQENFGMAEGVLMFVR HHHHHCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE ADDPLEVRMETVGRPVCEDDEVMLLGEDDQPVQPGEVGELCCRGPYTLRGYYRAPEHNAR CCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCC AFTSDGFYRSGDLMRQHPSGNYIVEGRKKDLINRGAEKISAEEIENLILAHPAVVNVACV EEECCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHEEEEE AMPDPLMGERNCACLILREGVSLSLDELVAFLKNQEIAKFKLPERVEIFTSFPLSNFGKV ECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCC SKKDLAATVAERVQAAQ HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 2,3-dihydroxybenzoate
Specific reaction: ATP + 2,3-dihydroxybenzoate = diphosphate + (2,3-dihydroxybenzoyl)adenylate
General reaction: Ligases; Forming Carbon-Sulfur Bonds; Acid-Thiol Ligases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884; 12221282 [H]