| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is benK [H]
Identifier: 116688186
GI number: 116688186
Start: 180076
End: 181479
Strand: Direct
Name: benK [H]
Synonym: Bcen2424_0162
Alternate gene names: 116688186
Gene position: 180076-181479 (Clockwise)
Preceding gene: 116688185
Following gene: 116688187
Centisome position: 5.17
GC content: 65.31
Gene sequence:
>1404_bases TTGACGACACCCCTCAATGTCCGGGAGGAGCTGGCGCACGCGCGCATCGGCCGCTTCCATCTACGCTTCGCGGTACTCGT CGCCTTCATCATGTTCTTCGACGGCTACGATCTCTTTAACGCCGCCTATGTGATTCCGCTCGTTCGACACGAATGGCAGC CGTCGCCGACGATGATCGGGATCATGCTGTCAAGCGGCATCGTCGGGCTGTCGATTGGCTCGGTGCTGCAAGGCCTGATC GCGGATCGGATCGGCCGGCGCAAGGTGATGCTCGGCGCGCTGTGGACTCTGACGCTGTCGAGCGGCCTGCTTGCTACCGT CGTCCACTCGGCGGAGAGCTTCGCGCTCGCGCGTCTCGTCATGGGCACCGCGCTCGGTATGGTCACGCCGCTCGCGCTCA CGTGCATCAACGAGTGGGCGCCGCGCCGCAACGCGAATACGTTCGCCACCTGGGTCTTTCAGTTTGGCTTTTCGGCGGGC GGCATCTTCGCGGGCATCGCGGGTCTCACGCTCACGCCGCATCTGGGCTGGCAGTCGCTTTACTTCGTCGGCGTGTTGTC GGCGCTCGTCGCGGCGGCGGCGATGAAATGGCTGCCTGAATCCGCGCAATATCTCGCGCTGCGCGGCCGCACCGACGACG TGCTCGCGCTGCTGAAAGCGGTTCGTCCCGAACGCGAAGCGGTTTATCGCGACGCCCACATTCAACTGATGCGCGCGACG TCGCGGCCCGGTTCGATCAGCGATCTGCTGTCCGCCGAATATCGCCGTAACACGCTGGTGCACTGGATTGCGGGCGCGTT GAGCCTGTTCTGCATCCACGGCCTGACCGGTTGGCTGCCGACGATGGTCGTGAACAAGGGCGGTGGCGTGTCGTCGGCGT TCGGCTACGGCACGGTGGTGATGATCGCGTCGGTGTTCGGCGGGATCTCGATGGGGTGGGTGGCTGACCGCATGCACAGC CGCATCCGCGCGATGGTGGTCGGCTACATCGTCGCGGCGCTCTTCATGGCAGGCCTCGCGCTCACGCTCGGCAAGACGGG CTCGATGGTGCTGGTCGCGTGCGTTGGCTTCTTCATCTTCGGCGCGCAGGCGATCATGAATAACTATCAGGCGATGTGTT ACCGCACGGAAATCCGCGGCACCGGCATGGGCGTTGCGGTGGGGTTGAACCGGATTGGCGGGATACTCGGGCCTGTTATC GTGGGTGTCGTCGCTTCGCTCAATCCCGACCCTCTGTGGACGTTCGCGGTGTTCACGGGCGCGCTGATCCTCGCCGCGGG CGTGATCGCGCTCGGTAAGACGGAGATCGCCGCGTTGCCCGCTTCGTGGCCCAACGCCGCGACGCAGCAGGACGACGAAG CGCTGCCTGCGGGCGCGCGACACGATCACGGCGTTGCAGGCTAA
Upstream 100 bases:
>100_bases AACGCACCGCGCCGCATCGCCTCGCAACGGCGATGTTTGACTTACCCGCCCGCCGGCATAAGGCGGCATCGGTCGAAAAT CAGAAAACACGGAGACAACC
Downstream 100 bases:
>100_bases GCGCAAACGCGCGAACATTCGGATCGTTTCGAATCTCAGGGCCGCCCGACGAGGCGGCCTTTTGCATGGAGACGCGTGAG ATGCGCTTTAACAGACTGGA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MTTPLNVREELAHARIGRFHLRFAVLVAFIMFFDGYDLFNAAYVIPLVRHEWQPSPTMIGIMLSSGIVGLSIGSVLQGLI ADRIGRRKVMLGALWTLTLSSGLLATVVHSAESFALARLVMGTALGMVTPLALTCINEWAPRRNANTFATWVFQFGFSAG GIFAGIAGLTLTPHLGWQSLYFVGVLSALVAAAAMKWLPESAQYLALRGRTDDVLALLKAVRPEREAVYRDAHIQLMRAT SRPGSISDLLSAEYRRNTLVHWIAGALSLFCIHGLTGWLPTMVVNKGGGVSSAFGYGTVVMIASVFGGISMGWVADRMHS RIRAMVVGYIVAALFMAGLALTLGKTGSMVLVACVGFFIFGAQAIMNNYQAMCYRTEIRGTGMGVAVGLNRIGGILGPVI VGVVASLNPDPLWTFAVFTGALILAAGVIALGKTEIAALPASWPNAATQQDDEALPAGARHDHGVAG
Sequences:
>Translated_467_residues MTTPLNVREELAHARIGRFHLRFAVLVAFIMFFDGYDLFNAAYVIPLVRHEWQPSPTMIGIMLSSGIVGLSIGSVLQGLI ADRIGRRKVMLGALWTLTLSSGLLATVVHSAESFALARLVMGTALGMVTPLALTCINEWAPRRNANTFATWVFQFGFSAG GIFAGIAGLTLTPHLGWQSLYFVGVLSALVAAAAMKWLPESAQYLALRGRTDDVLALLKAVRPEREAVYRDAHIQLMRAT SRPGSISDLLSAEYRRNTLVHWIAGALSLFCIHGLTGWLPTMVVNKGGGVSSAFGYGTVVMIASVFGGISMGWVADRMHS RIRAMVVGYIVAALFMAGLALTLGKTGSMVLVACVGFFIFGAQAIMNNYQAMCYRTEIRGTGMGVAVGLNRIGGILGPVI VGVVASLNPDPLWTFAVFTGALILAAGVIALGKTEIAALPASWPNAATQQDDEALPAGARHDHGVAG >Mature_466_residues TTPLNVREELAHARIGRFHLRFAVLVAFIMFFDGYDLFNAAYVIPLVRHEWQPSPTMIGIMLSSGIVGLSIGSVLQGLIA DRIGRRKVMLGALWTLTLSSGLLATVVHSAESFALARLVMGTALGMVTPLALTCINEWAPRRNANTFATWVFQFGFSAGG IFAGIAGLTLTPHLGWQSLYFVGVLSALVAAAAMKWLPESAQYLALRGRTDDVLALLKAVRPEREAVYRDAHIQLMRATS RPGSISDLLSAEYRRNTLVHWIAGALSLFCIHGLTGWLPTMVVNKGGGVSSAFGYGTVVMIASVFGGISMGWVADRMHSR IRAMVVGYIVAALFMAGLALTLGKTGSMVLVACVGFFIFGAQAIMNNYQAMCYRTEIRGTGMGVAVGLNRIGGILGPVIV GVVASLNPDPLWTFAVFTGALILAAGVIALGKTEIAALPASWPNAATQQDDEALPAGARHDHGVAG
Specific function: Probable uptake of benzoate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=433, Percent_Identity=24.9422632794457, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI213021148, Length=479, Percent_Identity=24.4258872651357, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI7662270, Length=340, Percent_Identity=23.8235294117647, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI216548223, Length=332, Percent_Identity=24.6987951807229, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI262399383, Length=265, Percent_Identity=24.5283018867925, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI166064021, Length=355, Percent_Identity=27.887323943662, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI87081723, Length=387, Percent_Identity=26.0981912144703, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082404, Length=377, Percent_Identity=22.5464190981432, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1788074, Length=364, Percent_Identity=26.3736263736264, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87082159, Length=387, Percent_Identity=24.2894056847545, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788068, Length=450, Percent_Identity=25.1111111111111, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32564663, Length=423, Percent_Identity=23.8770685579196, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI19922874, Length=401, Percent_Identity=21.6957605985037, Blast_Score=73, Evalue=5e-13, Organism=Drosophila melanogaster, GI24640198, Length=498, Percent_Identity=19.8795180722892, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640196, Length=498, Percent_Identity=19.8795180722892, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640200, Length=498, Percent_Identity=19.8795180722892, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19922616, Length=420, Percent_Identity=24.5238095238095, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49676; Mature: 49545
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPLNVREELAHARIGRFHLRFAVLVAFIMFFDGYDLFNAAYVIPLVRHEWQPSPTMIG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEE IMLSSGIVGLSIGSVLQGLIADRIGRRKVMLGALWTLTLSSGLLATVVHSAESFALARLV HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MGTALGMVTPLALTCINEWAPRRNANTFATWVFQFGFSAGGIFAGIAGLTLTPHLGWQSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCEECCCCCHHHH YFVGVLSALVAAAAMKWLPESAQYLALRGRTDDVLALLKAVRPEREAVYRDAHIQLMRAT HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHEECC SRPGSISDLLSAEYRRNTLVHWIAGALSLFCIHGLTGWLPTMVVNKGGGVSSAFGYGTVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH MIASVFGGISMGWVADRMHSRIRAMVVGYIVAALFMAGLALTLGKTGSMVLVACVGFFIF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GAQAIMNNYQAMCYRTEIRGTGMGVAVGLNRIGGILGPVIVGVVASLNPDPLWTFAVFTG HHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALILAAGVIALGKTEIAALPASWPNAATQQDDEALPAGARHDHGVAG HHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTPLNVREELAHARIGRFHLRFAVLVAFIMFFDGYDLFNAAYVIPLVRHEWQPSPTMIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEE IMLSSGIVGLSIGSVLQGLIADRIGRRKVMLGALWTLTLSSGLLATVVHSAESFALARLV HHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH MGTALGMVTPLALTCINEWAPRRNANTFATWVFQFGFSAGGIFAGIAGLTLTPHLGWQSL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCEECCCCCHHHH YFVGVLSALVAAAAMKWLPESAQYLALRGRTDDVLALLKAVRPEREAVYRDAHIQLMRAT HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHEECC SRPGSISDLLSAEYRRNTLVHWIAGALSLFCIHGLTGWLPTMVVNKGGGVSSAFGYGTVV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH MIASVFGGISMGWVADRMHSRIRAMVVGYIVAALFMAGLALTLGKTGSMVLVACVGFFIF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GAQAIMNNYQAMCYRTEIRGTGMGVAVGLNRIGGILGPVIVGVVASLNPDPLWTFAVFTG HHHHHHCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ALILAAGVIALGKTEIAALPASWPNAATQQDDEALPAGARHDHGVAG HHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9294456 [H]