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The map label for this gene is omp32 [H]

Identifier: 116688179

GI number: 116688179

Start: 172777

End: 173889

Strand: Reverse

Name: omp32 [H]

Synonym: Bcen2424_0155

Alternate gene names: 116688179

Gene position: 173889-172777 (Counterclockwise)

Preceding gene: 116688180

Following gene: 116688178

Centisome position: 4.99

GC content: 63.43

Gene sequence:

>1113_bases
ATGAAGCCATCCCTCGCGTCAGTTGCCCAGTTTGTCGCTCCGCTCGCCTCGCTGGCCGCTGCGCTTGTTACGCCCGCGGC
CTATGCCCAATCGTCCGTCACGCTGTACGGCATCATCGACACCGCCGTCCAAGTCGCCAATACGGGCGGCCAGACGGTCG
TTCGCGAGGCGTCCAGTTCGGTCGCGCCGAATCGCTGGGGCCTGTTCGGCAAGGAAGACCTCGGCGCGGGCTACAGCGCG
ATCTTCAAGCTCGAAAACGGTTTCAACCTCAATAACGGCGCGATGGCGAGCGCCAACACGCTGTTCAATCGCGAGGCGTG
GGTCGGCATTCGCGGGCCGTTCGGCCAGATTCAGGCGGGCAACAACTACACGCCGCTGTTCCGTACCTACGTGACCTACT
CGATCGGCGAACTGAACGCGCTCGCGTGGGGTAACGCGACCAACAACTACGTGTTCGTGCCGGTCGCGCGTACCGCCAAC
TCGATCCTCTACACGTCCAACGATCTCGCCGGCTTCACGCTGCGTGCGCTGTATGCGCGCGGAGCTAACGGTACGAGCGG
CGTGCCGGCGTCGCTGGGCGATACGCTGTCGGCGGGCGTGAACTTCAAGGCAGGCCAGTTCTCCGCCGATGTCGACTACC
TTCAGCAGCGCTTCGCCAATACCGCGACGCCCACGACGACGACTCCGGTCGGCACCGGACGCTACTACCTGATCGGCGCG
TCGTATGATTTCGGCGTCGTGAAAACCGCCGCGCTCTATCAGTTGCATCGCAACGCGACTGGCGTGAGCACGTCGATCTC
AAGCGCCTACGCGACGCCTAACCACGACTTCTACGAAGTGAACGCGCTGGTTCGTCACGTCCTCGACGGCTCGCTGCTTG
TGAGCTTCGGCCAGTACTTCCTAAAATCCGGCGGCGACGGACACGCGACCTCCTGGGCGCTGCGTTACGACTATCTCCTG
TCGAAACGCACGGGGTTCTATGTCGGCGTCGCGGGTGTGCGCAACCATGGGACGACCGCGTTCACCGTGACGGACGCGGC
GGGACCTGGCATTGCCGTCGCAGCGGGCAAAAACATCACGACCGAGATTCTCGGCATCGTGCATACCTTCTAG

Upstream 100 bases:

>100_bases
CGATAGTTTTGTATATTTTTGTTGACTCTCGATATTCATATACACAAAACTCCTGCTTTCACAGAGTGCCGCATCTCGAC
GGCACCGATCAGGAGACTTC

Downstream 100 bases:

>100_bases
TCAGCGAGTCCGACGATGGTCATGACAAATGTTCGCATTCCCGCCGCGCTGAGCATCATCGTCGGCGGCGGGCTTACTAT
GACGCTGGCGGTCGCGGCGG

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKPSLASVAQFVAPLASLAAALVTPAAYAQSSVTLYGIIDTAVQVANTGGQTVVREASSSVAPNRWGLFGKEDLGAGYSA
IFKLENGFNLNNGAMASANTLFNREAWVGIRGPFGQIQAGNNYTPLFRTYVTYSIGELNALAWGNATNNYVFVPVARTAN
SILYTSNDLAGFTLRALYARGANGTSGVPASLGDTLSAGVNFKAGQFSADVDYLQQRFANTATPTTTTPVGTGRYYLIGA
SYDFGVVKTAALYQLHRNATGVSTSISSAYATPNHDFYEVNALVRHVLDGSLLVSFGQYFLKSGGDGHATSWALRYDYLL
SKRTGFYVGVAGVRNHGTTAFTVTDAAGPGIAVAAGKNITTEILGIVHTF

Sequences:

>Translated_370_residues
MKPSLASVAQFVAPLASLAAALVTPAAYAQSSVTLYGIIDTAVQVANTGGQTVVREASSSVAPNRWGLFGKEDLGAGYSA
IFKLENGFNLNNGAMASANTLFNREAWVGIRGPFGQIQAGNNYTPLFRTYVTYSIGELNALAWGNATNNYVFVPVARTAN
SILYTSNDLAGFTLRALYARGANGTSGVPASLGDTLSAGVNFKAGQFSADVDYLQQRFANTATPTTTTPVGTGRYYLIGA
SYDFGVVKTAALYQLHRNATGVSTSISSAYATPNHDFYEVNALVRHVLDGSLLVSFGQYFLKSGGDGHATSWALRYDYLL
SKRTGFYVGVAGVRNHGTTAFTVTDAAGPGIAVAAGKNITTEILGIVHTF
>Mature_370_residues
MKPSLASVAQFVAPLASLAAALVTPAAYAQSSVTLYGIIDTAVQVANTGGQTVVREASSSVAPNRWGLFGKEDLGAGYSA
IFKLENGFNLNNGAMASANTLFNREAWVGIRGPFGQIQAGNNYTPLFRTYVTYSIGELNALAWGNATNNYVFVPVARTAN
SILYTSNDLAGFTLRALYARGANGTSGVPASLGDTLSAGVNFKAGQFSADVDYLQQRFANTATPTTTTPVGTGRYYLIGA
SYDFGVVKTAALYQLHRNATGVSTSISSAYATPNHDFYEVNALVRHVLDGSLLVSFGQYFLKSGGDGHATSWALRYDYLL
SKRTGFYVGVAGVRNHGTTAFTVTDAAGPGIAVAAGKNITTEILGIVHTF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38908; Mature: 38908

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSLASVAQFVAPLASLAAALVTPAAYAQSSVTLYGIIDTAVQVANTGGQTVVREASSS
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHCC
VAPNRWGLFGKEDLGAGYSAIFKLENGFNLNNGAMASANTLFNREAWVGIRGPFGQIQAG
CCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCEECC
NNYTPLFRTYVTYSIGELNALAWGNATNNYVFVPVARTANSILYTSNDLAGFTLRALYAR
CCCCHHHHHHEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHC
GANGTSGVPASLGDTLSAGVNFKAGQFSADVDYLQQRFANTATPTTTTPVGTGRYYLIGA
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
SYDFGVVKTAALYQLHRNATGVSTSISSAYATPNHDFYEVNALVRHVLDGSLLVSFGQYF
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LKSGGDGHATSWALRYDYLLSKRTGFYVGVAGVRNHGTTAFTVTDAAGPGIAVAAGKNIT
HHCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCH
TEILGIVHTF
HHHHHHHHCC
>Mature Secondary Structure
MKPSLASVAQFVAPLASLAAALVTPAAYAQSSVTLYGIIDTAVQVANTGGQTVVREASSS
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHCC
VAPNRWGLFGKEDLGAGYSAIFKLENGFNLNNGAMASANTLFNREAWVGIRGPFGQIQAG
CCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCEECC
NNYTPLFRTYVTYSIGELNALAWGNATNNYVFVPVARTANSILYTSNDLAGFTLRALYAR
CCCCHHHHHHEEEECCCEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHC
GANGTSGVPASLGDTLSAGVNFKAGQFSADVDYLQQRFANTATPTTTTPVGTGRYYLIGA
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC
SYDFGVVKTAALYQLHRNATGVSTSISSAYATPNHDFYEVNALVRHVLDGSLLVSFGQYF
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LKSGGDGHATSWALRYDYLLSKRTGFYVGVAGVRNHGTTAFTVTDAAGPGIAVAAGKNIT
HHCCCCCCCEEEEEEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCH
TEILGIVHTF
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]