Click here to switch to the map view.

The map label for this gene is 116688142

Identifier: 116688142

GI number: 116688142

Start: 127279

End: 127947

Strand: Direct

Name: 116688142

Synonym: Bcen2424_0118

Alternate gene names: NA

Gene position: 127279-127947 (Clockwise)

Preceding gene: 116688138

Following gene: 116688143

Centisome position: 3.65

GC content: 73.84

Gene sequence:

>669_bases
ATGCCGCCGCGACATGTTCAGGTTCCGGCGCCGCCCGGCTCACCGGCGGCGCAACCCGCGCCCGCGTTGCGCCGCCGGCC
GCGCCAGTCGCGTGCGCAGGCGAGTTCCGACGCGCTGCAACAGGCGTTCGTTCAGCTTTTGCTCGAACGCGGCTACGCGA
AGGCGACGATCCGCGAGATCGCGGCCGTCGCGGGCGTCAGCATCGGCACCTTCTACGAGTATTTCGGCGACAAGCAGAGC
CTCGCGGCGCTCTGCATCCACCGCCGCGTGCTGGCGCTGGCCGACCGGCTGCGCGACACGGTGCAGCGGTTGCGCGGTGC
GCCGCGGGCCGAACTCGCCGTCGCGCTGGTCGACCTCCAGGTCGATACGATCGCCGCCGACGCGGCGCTGTGGGGCGCGC
TGCTCGCACTGGAGCGGCAGGTGTCGCCGCTCGCCGCCTATCGCCGGCATTACGACGCCTATGTCGCGCTGTGGCGCGAC
GCGCTGGCCCAAGCGGCCGACCCGCCGCCGGCCGCAAGGCTCGACGGGCTCGCGCGGATGGCCCACACGATCTGCTATGG
CGGCCTGTCGCAGGCGCTGCTGACGCTCGGGCCGGCGCTCGATTTCGCCGCGCAGCGCCGTGAGCTGCGGGCCGTGCTGC
TCGCGTACCTCGCGGCCGCGGACGCGTAG

Upstream 100 bases:

>100_bases
TGCTTCGCGGTCAGCCGGCATCATGCCGCGCGGAGGGCGCTTTGCCGCGGATGCCGGCTTCCGGTAAAACGTATTCCCTG
CTGAATTCAGAGTAGCAAAT

Downstream 100 bases:

>100_bases
CTTTCCTCGGGGAAATGCCTGATTCGCATATCAGGCGCGCAGGCCGGCCTTGCCGCCAGGCCCTTCTCCGGGCGAGCCAT
GAGAAAAATGCATGGCCGCC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPPRHVQVPAPPGSPAAQPAPALRRRPRQSRAQASSDALQQAFVQLLLERGYAKATIREIAAVAGVSIGTFYEYFGDKQS
LAALCIHRRVLALADRLRDTVQRLRGAPRAELAVALVDLQVDTIAADAALWGALLALERQVSPLAAYRRHYDAYVALWRD
ALAQAADPPPAARLDGLARMAHTICYGGLSQALLTLGPALDFAAQRRELRAVLLAYLAAADA

Sequences:

>Translated_222_residues
MPPRHVQVPAPPGSPAAQPAPALRRRPRQSRAQASSDALQQAFVQLLLERGYAKATIREIAAVAGVSIGTFYEYFGDKQS
LAALCIHRRVLALADRLRDTVQRLRGAPRAELAVALVDLQVDTIAADAALWGALLALERQVSPLAAYRRHYDAYVALWRD
ALAQAADPPPAARLDGLARMAHTICYGGLSQALLTLGPALDFAAQRRELRAVLLAYLAAADA
>Mature_221_residues
PPRHVQVPAPPGSPAAQPAPALRRRPRQSRAQASSDALQQAFVQLLLERGYAKATIREIAAVAGVSIGTFYEYFGDKQSL
AALCIHRRVLALADRLRDTVQRLRGAPRAELAVALVDLQVDTIAADAALWGALLALERQVSPLAAYRRHYDAYVALWRDA
LAQAADPPPAARLDGLARMAHTICYGGLSQALLTLGPALDFAAQRRELRAVLLAYLAAADA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23902; Mature: 23771

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRHVQVPAPPGSPAAQPAPALRRRPRQSRAQASSDALQQAFVQLLLERGYAKATIREI
CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAVAGVSIGTFYEYFGDKQSLAALCIHRRVLALADRLRDTVQRLRGAPRAELAVALVDLQ
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VDTIAADAALWGALLALERQVSPLAAYRRHYDAYVALWRDALAQAADPPPAARLDGLARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AHTICYGGLSQALLTLGPALDFAAQRRELRAVLLAYLAAADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPRHVQVPAPPGSPAAQPAPALRRRPRQSRAQASSDALQQAFVQLLLERGYAKATIREI
CCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
AAVAGVSIGTFYEYFGDKQSLAALCIHRRVLALADRLRDTVQRLRGAPRAELAVALVDLQ
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VDTIAADAALWGALLALERQVSPLAAYRRHYDAYVALWRDALAQAADPPPAARLDGLARM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
AHTICYGGLSQALLTLGPALDFAAQRRELRAVLLAYLAAADA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA