| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is livK [C]
Identifier: 116688138
GI number: 116688138
Start: 121960
End: 123099
Strand: Direct
Name: livK [C]
Synonym: Bcen2424_0114
Alternate gene names: 116688138
Gene position: 121960-123099 (Clockwise)
Preceding gene: 116688137
Following gene: 116688142
Centisome position: 3.5
GC content: 63.6
Gene sequence:
>1140_bases ATGCAACACACGATGAAAAAGGTGGCAGGCGCGACGTTCGTCGCGGTCATGTCGCTGGCGGGGACGGCTCATGCGGATGA CGTGAAGATTGGTTACGCAGGGCCGATGACGGGCGCGCAGGCGCACTACGGCAAGGATATGCAGAACGGGATCGTGCTCG CGCTGGAAGACTTCAACGCGACGAACCCGAAGATCGGCGGCAAGGCCGTGAAGTTCGTGCTCGACACGCAGGACGACCAG GCTGACCCGCGCACGGGTACGACGGTCGCCCAGAAGCTGGTCGACGACGGCATCAAGGGCATGCTCGGCCACTTCAACTC GGGCACGACGATTCCGGCTTCGCGCATCTACGCGAACGCGGGCATTCCGGAAATCGCGATGGCGACGGCGCCGGAATACA CGCAGCAGGGTTACAAGACGACCTTCCGAATGATGACGTCCGACACGCAGCAGGGCTCGGTGGCCGGCACGTTCGCGTCG AAGGATCTCGGCATGAAGAAGATCGCGATCGTCGACGACCGCACGGCCTACGGCCAGGGTCTCGCCGACCAGTTCGAGAA GGCCGCGAAGGCCGGCGGCGCGACGATCGTCGACCGCGAATTCACGAACGACAAGGCCGTCGACTTCAAGGCGATTCTCA CGAAGCTGAAGGCAGCGAAGCCGGACCTCGTCTACTACGGCGGCGCGGATTCGCAGGCAGCGCCGATGGTCAAGCAGATG AAGACGCTCGGCATCACCGCCCCGCTGATGAGCGGCGAAATGGTGAAGACGCCGACGTTCCTGAAGATCGCGGGCAACGC GGCCGAAGGCACGATCGCATCGCTGGCCGGCCTGCCGCTGGAAGAAATGCCGGGCGGCAAGGCTTACGCCGACAAGTACA AGAAGCGTTTCGGCGAAGACGTGCAGACGTACTCGCCGTACGCGTACGACGGCGCGATGGCGATGCTGAACGCGATGAAG AAGGCCGATTCGACCGATCCGGCGAAGTACCTGCCGGTGCTCGCGAAGACCGACATGGCCGGTGTGACGTCGACGCACGT CGCGTACGACGCGAAGGGCGACCTGAAGAACGGCGGCATCACGATGTACAAGGTCGAGAAGGGCGACTGGAAGCCGCTGA AGAGCATCGGCGGCAAGTAA
Upstream 100 bases:
>100_bases GATGACGATCGGCTGATCATCCTTGCCGTTCGGATCAAACAAAGGAAGCGGCCAGGCGATCCCGAAGCCGCTCCATTTAC CCTGGTACCAAGGAGATGCT
Downstream 100 bases:
>100_bases GCAGCCAGTGACGTGACGAACGGGCGGCGGCGCACGTCGCTGCCCCGCCGGTCATGCGAAAAAGCCACCTGGCCGTCGGG CCGGGTGGCTTTTTCTTTGG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MQHTMKKVAGATFVAVMSLAGTAHADDVKIGYAGPMTGAQAHYGKDMQNGIVLALEDFNATNPKIGGKAVKFVLDTQDDQ ADPRTGTTVAQKLVDDGIKGMLGHFNSGTTIPASRIYANAGIPEIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAGTFAS KDLGMKKIAIVDDRTAYGQGLADQFEKAAKAGGATIVDREFTNDKAVDFKAILTKLKAAKPDLVYYGGADSQAAPMVKQM KTLGITAPLMSGEMVKTPTFLKIAGNAAEGTIASLAGLPLEEMPGGKAYADKYKKRFGEDVQTYSPYAYDGAMAMLNAMK KADSTDPAKYLPVLAKTDMAGVTSTHVAYDAKGDLKNGGITMYKVEKGDWKPLKSIGGK
Sequences:
>Translated_379_residues MQHTMKKVAGATFVAVMSLAGTAHADDVKIGYAGPMTGAQAHYGKDMQNGIVLALEDFNATNPKIGGKAVKFVLDTQDDQ ADPRTGTTVAQKLVDDGIKGMLGHFNSGTTIPASRIYANAGIPEIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAGTFAS KDLGMKKIAIVDDRTAYGQGLADQFEKAAKAGGATIVDREFTNDKAVDFKAILTKLKAAKPDLVYYGGADSQAAPMVKQM KTLGITAPLMSGEMVKTPTFLKIAGNAAEGTIASLAGLPLEEMPGGKAYADKYKKRFGEDVQTYSPYAYDGAMAMLNAMK KADSTDPAKYLPVLAKTDMAGVTSTHVAYDAKGDLKNGGITMYKVEKGDWKPLKSIGGK >Mature_379_residues MQHTMKKVAGATFVAVMSLAGTAHADDVKIGYAGPMTGAQAHYGKDMQNGIVLALEDFNATNPKIGGKAVKFVLDTQDDQ ADPRTGTTVAQKLVDDGIKGMLGHFNSGTTIPASRIYANAGIPEIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAGTFAS KDLGMKKIAIVDDRTAYGQGLADQFEKAAKAGGATIVDREFTNDKAVDFKAILTKLKAAKPDLVYYGGADSQAAPMVKQM KTLGITAPLMSGEMVKTPTFLKIAGNAAEGTIASLAGLPLEEMPGGKAYADKYKKRFGEDVQTYSPYAYDGAMAMLNAMK KADSTDPAKYLPVLAKTDMAGVTSTHVAYDAKGDLKNGGITMYKVEKGDWKPLKSIGGK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=355, Percent_Identity=33.2394366197183, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI48994941, Length=341, Percent_Identity=31.6715542521994, Blast_Score=155, Evalue=5e-39,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40081; Mature: 40081
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHTMKKVAGATFVAVMSLAGTAHADDVKIGYAGPMTGAQAHYGKDMQNGIVLALEDFNA CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCCCCCEEEEEECCCC TNPKIGGKAVKFVLDTQDDQADPRTGTTVAQKLVDDGIKGMLGHFNSGTTIPASRIYANA CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC GIPEIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAGTFASKDLGMKKIAIVDDRTAYGQG CCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCHHCCC LADQFEKAAKAGGATIVDREFTNDKAVDFKAILTKLKAAKPDLVYYGGADSQAAPMVKQM HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH KTLGITAPLMSGEMVKTPTFLKIAGNAAEGTIASLAGLPLEEMPGGKAYADKYKKRFGED HHHCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHCCC VQTYSPYAYDGAMAMLNAMKKADSTDPAKYLPVLAKTDMAGVTSTHVAYDAKGDLKNGGI HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCE TMYKVEKGDWKPLKSIGGK EEEEECCCCCHHHHHCCCC >Mature Secondary Structure MQHTMKKVAGATFVAVMSLAGTAHADDVKIGYAGPMTGAQAHYGKDMQNGIVLALEDFNA CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCCCCCCEEEEEECCCC TNPKIGGKAVKFVLDTQDDQADPRTGTTVAQKLVDDGIKGMLGHFNSGTTIPASRIYANA CCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC GIPEIAMATAPEYTQQGYKTTFRMMTSDTQQGSVAGTFASKDLGMKKIAIVDDRTAYGQG CCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCHHCCC LADQFEKAAKAGGATIVDREFTNDKAVDFKAILTKLKAAKPDLVYYGGADSQAAPMVKQM HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHH KTLGITAPLMSGEMVKTPTFLKIAGNAAEGTIASLAGLPLEEMPGGKAYADKYKKRFGED HHHCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHCCC VQTYSPYAYDGAMAMLNAMKKADSTDPAKYLPVLAKTDMAGVTSTHVAYDAKGDLKNGGI HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCE TMYKVEKGDWKPLKSIGGK EEEEECCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA