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The map label for this gene is 116688097

Identifier: 116688097

GI number: 116688097

Start: 75578

End: 76108

Strand: Direct

Name: 116688097

Synonym: Bcen2424_0073

Alternate gene names: NA

Gene position: 75578-76108 (Clockwise)

Preceding gene: 116688096

Following gene: 116688100

Centisome position: 2.17

GC content: 62.52

Gene sequence:

>531_bases
ATGAGTTCACGCAGGATCGCGGTGCGCCGCTCGGGAGTACACGGCAAGGGCGTGTTCGCCGTGGCGCCGATCAAGGCCGG
CGAGCGCGTAGTGGAATACAAGGGCGAACGAATCTCGTGGAAGGAAGCGCTGCGCCGACATCCGCACGACCCGAGCGAGC
CGAACCATACGTTCTACTTCGCACTGGACGAAGGCGGCGTGATCGACGGCAAGATCGACGGCAACAGCGCGCGCTGGATC
AACCATTCGTGCGCGCCGAACTGCGAAGCCGAGGAAGTCAAAGGCCGCGTGTACATCCACGCGCTGCGCGACATCGGGCC
GGAAGAGGAGCTGTTCTACGACTACGGCCTCGTGATCGACGCGAAGCTGACGAAGAAGCTCAAGCGCGAATACGCGTGCC
ACTGCGGGGCGGAGTCGTGCCGCGGCACGTTGCTCGCGACGTCCGACGAAGGCGGGAAGAAGAAAAAGAAGAAGGACAAG
AAGGACGGCAAGCCGGCGTCCGGTTCGAAGGACAAGAAGAACAAGAAGTGA

Upstream 100 bases:

>100_bases
CCCGACGCGGCACCGACCGGTGCCGCGTTTTCGTTTTGCGCGGCGCCCGGCCGCGATCGCGGCGGCTTCCATTCAAGTCG
TCTTCACAAGGATTGGTTCG

Downstream 100 bases:

>100_bases
TGCAGGCGGCAGCGCATCGCGCGCTGCCGCTGTCGTTTCAGTCGACGGTTGCCGCGTCGTCGCGTCGTCGCGGCGCGTCA
TCCGCTTTCCGTCTTTCCGT

Product: nuclear protein SET

Products: NA

Alternate protein names: Histone-Lysine N-Methyltransferase; SET Domain-Containing Protein; SET Domain Protein; Set Domain Protein; HistoNe-Lysine N-Methyltransferase H3 Lysine-4 Specific; Setd1a Protein; Nuclear Protein Set; Zinc Finger Protein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWI
NHSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVIDAKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDK
KDGKPASGSKDKKNKK

Sequences:

>Translated_176_residues
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWI
NHSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVIDAKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDK
KDGKPASGSKDKKNKK
>Mature_175_residues
SSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYFALDEGGVIDGKIDGNSARWIN
HSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVIDAKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDKK
DGKPASGSKDKKNKK

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56550039, Length=147, Percent_Identity=36.734693877551, Blast_Score=91, Evalue=6e-19,
Organism=Homo sapiens, GI110349788, Length=146, Percent_Identity=36.3013698630137, Blast_Score=87, Evalue=7e-18,
Organism=Homo sapiens, GI7662046, Length=144, Percent_Identity=37.5, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI55741677, Length=146, Percent_Identity=34.9315068493151, Blast_Score=84, Evalue=5e-17,
Organism=Homo sapiens, GI210032580, Length=140, Percent_Identity=37.8571428571429, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI91718902, Length=140, Percent_Identity=35.7142857142857, Blast_Score=80, Evalue=6e-16,
Organism=Homo sapiens, GI19913358, Length=136, Percent_Identity=37.5, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI19913350, Length=136, Percent_Identity=37.5, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI19913348, Length=136, Percent_Identity=37.5, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI109633019, Length=136, Percent_Identity=37.5, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI27477095, Length=144, Percent_Identity=35.4166666666667, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI13699811, Length=161, Percent_Identity=35.4037267080745, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI148762969, Length=140, Percent_Identity=34.2857142857143, Blast_Score=67, Evalue=5e-12,
Organism=Homo sapiens, GI197313748, Length=164, Percent_Identity=32.9268292682927, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI19923586, Length=144, Percent_Identity=35.4166666666667, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17552316, Length=145, Percent_Identity=37.2413793103448, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193210440, Length=143, Percent_Identity=33.5664335664336, Blast_Score=78, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17552320, Length=146, Percent_Identity=35.6164383561644, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17552318, Length=146, Percent_Identity=35.6164383561644, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25148426, Length=140, Percent_Identity=39.2857142857143, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25148423, Length=140, Percent_Identity=39.2857142857143, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565204, Length=175, Percent_Identity=30.8571428571429, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71993684, Length=137, Percent_Identity=32.8467153284672, Blast_Score=66, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6321911, Length=144, Percent_Identity=38.1944444444444, Blast_Score=95, Evalue=6e-21,
Organism=Drosophila melanogaster, GI62472551, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17136558, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19550181, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19550184, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17136556, Length=143, Percent_Identity=35.6643356643357, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24639197, Length=140, Percent_Identity=36.4285714285714, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28571451, Length=140, Percent_Identity=36.4285714285714, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24650756, Length=167, Percent_Identity=34.1317365269461, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24641786, Length=159, Percent_Identity=33.9622641509434, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17737643, Length=166, Percent_Identity=32.5301204819277, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360813, Length=159, Percent_Identity=33.9622641509434, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161078181, Length=162, Percent_Identity=30.8641975308642, Blast_Score=63, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19608; Mature: 19477

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50280 SET ; PS50868 POST_SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYF
CCCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEECHHHHHHCCCCCCCCCCCEEEE
ALDEGGVIDGKIDGNSARWINHSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVID
EECCCCEEEEEECCCCCEEECCCCCCCCCHHHCCCEEEEEEECCCCCCHHEEEECCEEEE
AKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDKKDGKPASGSKDKKNKK
HHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSRRIAVRRSGVHGKGVFAVAPIKAGERVVEYKGERISWKEALRRHPHDPSEPNHTFYF
CCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCEECHHHHHHCCCCCCCCCCCEEEE
ALDEGGVIDGKIDGNSARWINHSCAPNCEAEEVKGRVYIHALRDIGPEEELFYDYGLVID
EECCCCEEEEEECCCCCEEECCCCCCCCCHHHCCCEEEEEEECCCCCCHHEEEECCEEEE
AKLTKKLKREYACHCGAESCRGTLLATSDEGGKKKKKKDKKDGKPASGSKDKKNKK
HHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA