Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116688077

Identifier: 116688077

GI number: 116688077

Start: 53785

End: 55158

Strand: Reverse

Name: 116688077

Synonym: Bcen2424_0053

Alternate gene names: NA

Gene position: 55158-53785 (Counterclockwise)

Preceding gene: 116688078

Following gene: 116688076

Centisome position: 1.58

GC content: 73.44

Gene sequence:

>1374_bases
GTGAGCACGTTGATTGTTTCTTTGCCGCCGCGCGAGCCTGCCGTGCCGTTGCAGGAATGGCAGTGGCCCGAGCTGCCGTT
CACGCTCGTCGACAAGGCCGGCCAGGTGCAGCGCGCGGGCCGCGCCGCGCTCGCGCTGCTGCCGCGCGCGAACGCGACGG
TGCTGATCGTCGCCGCACGCGACGTGCTGCTGCTGGCCGCGACCGTGCCGCCGCTGAAGGGGCCGAAGCTGCGCCAGGCG
CTGCCCAACATCGTCGAGGATCAACTGATCCAGGACCCGCTCGGCTGCCACATCGCGCTCGATCCGGCCGCGCTGCCCGA
CGGGCGTCGCGTACTGGCCGTCGTCGACCGCGCGTGGTTCCGCACGATCTGCGACGCGTTCACCGCGGCCGGCCACCGGC
ACCTGAGCGCGGTGCCCGCGACCCGCTGCCTGCCGGCGCCGCGTGCGTCGGCCGAAGCGGCCTCCGCCGTGTTGGCCGAC
GGCCAGGCTACCGACGCCGCCGCGCTCGTCGCGGACGTCACCGAGCCGCCTGCCCGCCCGCCGACGGTCGCCGCGGTGCT
CGGACTCGCGACGGCGGTCGAACCGGTGCTCGTCGAAGCCGGCGCGCTGCCGGCCGCGGCCGGGGCGCCGCGCCTCGAGC
TGGCGGTCGCGCGCGGCGCGCTCGGCGAAGGCTTCGCGGCGCCCGCGTCGCGCGCGGCCGGCACGCTGGCCGCGCTCGCG
GGCGGCGGCGACGTCGAACTGTACGAACTCGGCGAACCGGGCGCGGAGCCGCGGCTCGCGTCGGTCGGTCGCACCGACGC
GGCGCTGCTGCCGGGCGCCGCGCCGCTGTCGTTCGACACGTTCGCGCGCCGGGCGCTGACCGAACCATTCGATCTGTGCC
AGTTCGAATTCGAATCGCAGCCGTGGCGCTTCGACCGCGCGACGGTGAAGCGCCTGCGCGTGCCGATCGCGCTGGCCGCG
GCGACGCTCGGCGTCGCGGTGATCGGGATGAACCTGCACTGGTGGAAGCTGTCGCGTGAGCGCGATGCGCTGTCCGCGCA
GATCACCGAGACGCTGCTGTCTGCCTTCCCGAAGACGACCACCGTGCTCGATCCGCCCGCGCAGATGCAGCGCCAGCTCG
ACCAGCTTCGGCTCGCGGCCGGCGAGCTGTCGCCGAACGATTTCCTCGCGCTGTCGAGCGGCTTGTCGCGCTCGATGGGC
GCGCTGCCGCTGAACGGCATCGCGTCGCTCGACTATCACGACCGGCGGCTCGACGTCGGCTTCAAGCCGGAGGTCAAGGT
CGATCCCGATTTCACGCAGCGCCTCGCGCGTAACGGACTGTCCGGCGAAGTCGACAGCAACACGGGCAAATGGACGATCC
GGAGCCGCTCATGA

Upstream 100 bases:

>100_bases
ACCGCACCTCGCTCGTGTATCGTGATCCGACCACGCACTCGACGCGGGTCGTGCGCATCCGCGACCAGCTATAACGACGC
CAATCGGGAGAGGAGCTCTT

Downstream 100 bases:

>100_bases
AAGCCGAACAACTGAACCAGACGCTGGCCCAGTTCTGGGGCGAGCGCACGCCGCGCGAGAAGACGCTGCTCGGCTGGGGC
GGCGCCGTGCTGGCGATCGC

Product: general secretion pathway protein L

Products: NA

Alternate protein names: General Secretion Pathway L; General Secretory Pathway Protein L; General Secretory Pathway L Transmembrane Protein; General Secretion Pathway L Protein; Type II Secretory Pathway Component PulL

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MSTLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAARDVLLLAATVPPLKGPKLRQA
LPNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWFRTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLAD
GQATDAAALVADVTEPPARPPTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALA
GGGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQPWRFDRATVKRLRVPIALAA
ATLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTTTVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMG
ALPLNGIASLDYHDRRLDVGFKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS

Sequences:

>Translated_457_residues
MSTLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAARDVLLLAATVPPLKGPKLRQA
LPNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWFRTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLAD
GQATDAAALVADVTEPPARPPTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALA
GGGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQPWRFDRATVKRLRVPIALAA
ATLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTTTVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMG
ALPLNGIASLDYHDRRLDVGFKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS
>Mature_456_residues
STLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAARDVLLLAATVPPLKGPKLRQAL
PNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWFRTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLADG
QATDAAALVADVTEPPARPPTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALAG
GGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQPWRFDRATVKRLRVPIALAAA
TLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTTTVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMGA
LPLNGIASLDYHDRRLDVGFKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48192; Mature: 48061

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAAR
CCEEEEECCCCCCCCCHHCCCCCCCCHHHHCCCCHHHHHCCCEEEEECCCCCEEEEEEEC
DVLLLAATVPPLKGPKLRQALPNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWF
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHHHHHHH
RTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLADGQATDAAALVADVTEPPARP
HHHHHHHHHCCCCHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHEECCCCCCCC
PTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHEEC
GGGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQ
CCCCEEEEECCCCCCCCCHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHEECCCC
PWRFDRATVKRLRVPIALAAATLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
TVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMGALPLNGIASLDYHDRRLDVG
EEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCCCCCCCEECCCCCCCEECCC
FKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS
CCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
STLIVSLPPREPAVPLQEWQWPELPFTLVDKAGQVQRAGRAALALLPRANATVLIVAAR
CEEEEECCCCCCCCCHHCCCCCCCCHHHHCCCCHHHHHCCCEEEEECCCCCEEEEEEEC
DVLLLAATVPPLKGPKLRQALPNIVEDQLIQDPLGCHIALDPAALPDGRRVLAVVDRAWF
CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHHHHHHH
RTICDAFTAAGHRHLSAVPATRCLPAPRASAEAASAVLADGQATDAAALVADVTEPPARP
HHHHHHHHHCCCCHHHCCCHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHEECCCCCCCC
PTVAAVLGLATAVEPVLVEAGALPAAAGAPRLELAVARGALGEGFAAPASRAAGTLAALA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHCCCCCCCCCCHHHHHHHHHEEC
GGGDVELYELGEPGAEPRLASVGRTDAALLPGAAPLSFDTFARRALTEPFDLCQFEFESQ
CCCCEEEEECCCCCCCCCHHHCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHEECCCC
PWRFDRATVKRLRVPIALAAATLGVAVIGMNLHWWKLSRERDALSAQITETLLSAFPKTT
CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
TVLDPPAQMQRQLDQLRLAAGELSPNDFLALSSGLSRSMGALPLNGIASLDYHDRRLDVG
EEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCCCCCCCCEECCCCCCCEECCC
FKPEVKVDPDFTQRLARNGLSGEVDSNTGKWTIRSRS
CCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA