Click here to switch to the map view.

The map label for this gene is 116626895

Identifier: 116626895

GI number: 116626895

Start: 9874193

End: 9876043

Strand: Direct

Name: 116626895

Synonym: Acid_7872

Alternate gene names: NA

Gene position: 9874193-9876043 (Clockwise)

Preceding gene: 116626893

Following gene: 116626905

Centisome position: 99.08

GC content: 63.43

Gene sequence:

>1851_bases
ATGAAGACGCTGCTTTTTTTGTTCCTCGTCTGCTCGGCGACGGCTCAGTTTCGAACCGATAATCAGCAATATACAGGCGT
CGATCTCCCTCCCCGCCACTTGGTAATCACGCTCGACGACGGCGTCTCCGGAACCATTTCTTCCACCGGATTCAATCAAA
CGCAGAAACTCGGTGAGTTGCTGGCCAACATGGGAATCTTAGCCACTTTCTTCCAGGTCGGCTGCCATTTTGAAACCCCC
TCCGTCAACGGATCCGATCCGCTTTCGTCCGCCTGTATGAATGGCGACGTGCACCCTCTCAGCATCGATCGCGAACTGCT
GGGCCGCGGCCATATCATCGCCAACCACACCTGGTTTCACGTACCCCTCACCTACATCAAGTCGGACCCGGCACGCGTGC
TGCGCCACGTCCGCCTCGCGCAGCAGATGCTCGACCAGTTCCAACCTGACGGCATAAGGCTCTTCCGCCCACCCGGCCTC
GCCTTCGATCCCACCGTTGCCGCCATCCTCAACGCCGACCCGGCGATTGGAAAACTGGTCGGCCCCATCGGCATGGATGT
CGATGCCACGGCTCCGGTGGGAGGTCTCCAATTCAACGGGGATGCGGGCTGGTTCGCGGCCGGAATGAGCCCCGAGGATT
GCGCCGACGCCTACTTCGAACAGATTCAGCAACAGTGCGCCTCACAAGGCTGTATCGTGCTGATTCACGATCGCACCGAG
GTCGAGATTACGACCGACTGGGCGCTCCGCGTCACCCGTCGCCTGTTCGAGCGCCTGGGTCCGGCATTCACTGCCGTACC
CACAGACGCCACGCCCGGCATTCTGGGAAACACGCGCGTCGGCGCGGTCACGCTACTCACACGCGAGTTCGGCTCCAGCG
ATGGAATCGGCCCCACCGTCATGGGCAATATCACGGGCACCCGGAAAGCCGCAGCCTGCAAGGTACGCGGCGATATGCAG
ATCTGGTGCGCGCTACCTTCGGCCTCCGGCGGTGCGGTCCCCACGCTCGATCCCGCTTCGCCGTGGCTCGCCATCGCCGA
CCCCGAGTGGGTCGCCTCAGGCTCCAAGTTCTGGCTCGCGGATATCGATGGCGATGGTAGCGATGACGTGGTGTACGGCA
CCTCCCGCGGCATCTGGGCTGCACTTTCCAACGAGCGCGCCGGATTCGGCGAACCCAAACTGGTCTCCGCGTATTTCTCC
ACCGCCAACGGTTGGGATGCCGCCACCATCCGCAACGGCCTGCGCTTCGGCAACTTCTACGCCCGCGCGCCCGGCCCCAA
GGACATCCTCGTCGCCGGTCCGCGCGGCATCGTGGTGGCGCGCAACTTCGCCCGAAATTTCGGCGAGCCGGAGTTGTGGT
CCACCTACGCGCCAAGCCCCCTCGACCTCGTGACCTTGCAGGGTCGCGACCTAAACGGCGATGGGTTCGACGACGTCGTA
ATCCGCAATCTCGCCCTCGGCCAGTTTCTGGCGCTCACCACCCACAATGGCGGCATGGGTGGCGTTGCCTTCAACCCTCC
GGACCCCTGGATGACCTTCGCAGGCCAGACCAACCTCACTGCCTGGAACAACCCCAGCCACGGCGAGACCATTCGCCTCG
TGCGCTTCGGAAAGAAACTGATGCTCACCGCGGGCTCCGCCACCGGCCTTGTCTACTCCGCCATCGATGCCGGCAAGTTC
AGCCCCGGCTGGCGTCATCTCTGCAATACCTGCTACACCACCCTCACCGATTGGCGCCCCGAGCGTCAAGCCGCAGCAAT
TGCTTGGGCCGACCTGGACGGCTCAGGCTCCGAATGGGTGGTCTTCACGCGCGACACTGGCCTCGAAATCGCCCCCGGCG
TGGCACCATAA

Upstream 100 bases:

>100_bases
GCCCGCTTAATCCTAGACTCGCAAACTCGCCAGGGCCCATCGACTCTCCGGAAGTACGATCCAGCTCCAGCACCCGAAGT
GTGTTTGCGCGAGGAAACGC

Downstream 100 bases:

>100_bases
AACTGATACAAGATGCTGGTTTCTCTCTCCGGTCACTGCGCCTTCCGCATCGCCCGCAGATCGATCCCCAACGCCTGGCA
CTTCTTGTACAAATGACTGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MKTLLFLFLVCSATAQFRTDNQQYTGVDLPPRHLVITLDDGVSGTISSTGFNQTQKLGELLANMGILATFFQVGCHFETP
SVNGSDPLSSACMNGDVHPLSIDRELLGRGHIIANHTWFHVPLTYIKSDPARVLRHVRLAQQMLDQFQPDGIRLFRPPGL
AFDPTVAAILNADPAIGKLVGPIGMDVDATAPVGGLQFNGDAGWFAAGMSPEDCADAYFEQIQQQCASQGCIVLIHDRTE
VEITTDWALRVTRRLFERLGPAFTAVPTDATPGILGNTRVGAVTLLTREFGSSDGIGPTVMGNITGTRKAAACKVRGDMQ
IWCALPSASGGAVPTLDPASPWLAIADPEWVASGSKFWLADIDGDGSDDVVYGTSRGIWAALSNERAGFGEPKLVSAYFS
TANGWDAATIRNGLRFGNFYARAPGPKDILVAGPRGIVVARNFARNFGEPELWSTYAPSPLDLVTLQGRDLNGDGFDDVV
IRNLALGQFLALTTHNGGMGGVAFNPPDPWMTFAGQTNLTAWNNPSHGETIRLVRFGKKLMLTAGSATGLVYSAIDAGKF
SPGWRHLCNTCYTTLTDWRPERQAAAIAWADLDGSGSEWVVFTRDTGLEIAPGVAP

Sequences:

>Translated_616_residues
MKTLLFLFLVCSATAQFRTDNQQYTGVDLPPRHLVITLDDGVSGTISSTGFNQTQKLGELLANMGILATFFQVGCHFETP
SVNGSDPLSSACMNGDVHPLSIDRELLGRGHIIANHTWFHVPLTYIKSDPARVLRHVRLAQQMLDQFQPDGIRLFRPPGL
AFDPTVAAILNADPAIGKLVGPIGMDVDATAPVGGLQFNGDAGWFAAGMSPEDCADAYFEQIQQQCASQGCIVLIHDRTE
VEITTDWALRVTRRLFERLGPAFTAVPTDATPGILGNTRVGAVTLLTREFGSSDGIGPTVMGNITGTRKAAACKVRGDMQ
IWCALPSASGGAVPTLDPASPWLAIADPEWVASGSKFWLADIDGDGSDDVVYGTSRGIWAALSNERAGFGEPKLVSAYFS
TANGWDAATIRNGLRFGNFYARAPGPKDILVAGPRGIVVARNFARNFGEPELWSTYAPSPLDLVTLQGRDLNGDGFDDVV
IRNLALGQFLALTTHNGGMGGVAFNPPDPWMTFAGQTNLTAWNNPSHGETIRLVRFGKKLMLTAGSATGLVYSAIDAGKF
SPGWRHLCNTCYTTLTDWRPERQAAAIAWADLDGSGSEWVVFTRDTGLEIAPGVAP
>Mature_616_residues
MKTLLFLFLVCSATAQFRTDNQQYTGVDLPPRHLVITLDDGVSGTISSTGFNQTQKLGELLANMGILATFFQVGCHFETP
SVNGSDPLSSACMNGDVHPLSIDRELLGRGHIIANHTWFHVPLTYIKSDPARVLRHVRLAQQMLDQFQPDGIRLFRPPGL
AFDPTVAAILNADPAIGKLVGPIGMDVDATAPVGGLQFNGDAGWFAAGMSPEDCADAYFEQIQQQCASQGCIVLIHDRTE
VEITTDWALRVTRRLFERLGPAFTAVPTDATPGILGNTRVGAVTLLTREFGSSDGIGPTVMGNITGTRKAAACKVRGDMQ
IWCALPSASGGAVPTLDPASPWLAIADPEWVASGSKFWLADIDGDGSDDVVYGTSRGIWAALSNERAGFGEPKLVSAYFS
TANGWDAATIRNGLRFGNFYARAPGPKDILVAGPRGIVVARNFARNFGEPELWSTYAPSPLDLVTLQGRDLNGDGFDDVV
IRNLALGQFLALTTHNGGMGGVAFNPPDPWMTFAGQTNLTAWNNPSHGETIRLVRFGKKLMLTAGSATGLVYSAIDAGKF
SPGWRHLCNTCYTTLTDWRPERQAAAIAWADLDGSGSEWVVFTRDTGLEIAPGVAP

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65998; Mature: 65998

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLFLFLVCSATAQFRTDNQQYTGVDLPPRHLVITLDDGVSGTISSTGFNQTQKLGEL
CHHHHHHHHHHHCHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
LANMGILATFFQVGCHFETPSVNGSDPLSSACMNGDVHPLSIDRELLGRGHIIANHTWFH
HHCCHHHHHHHHHCCEECCCCCCCCCCHHHHHCCCCCCEEECCHHHHCCCCEEECCEEEE
VPLTYIKSDPARVLRHVRLAQQMLDQFQPDGIRLFRPPGLAFDPTVAAILNADPAIGKLV
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEECCCCHHHHHH
GPIGMDVDATAPVGGLQFNGDAGWFAAGMSPEDCADAYFEQIQQQCASQGCIVLIHDRTE
CCCCCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCE
VEITTDWALRVTRRLFERLGPAFTAVPTDATPGILGNTRVGAVTLLTREFGSSDGIGPTV
EEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
MGNITGTRKAAACKVRGDMQIWCALPSASGGAVPTLDPASPWLAIADPEWVASGSKFWLA
EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEE
DIDGDGSDDVVYGTSRGIWAALSNERAGFGEPKLVSAYFSTANGWDAATIRNGLRFGNFY
EECCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEHHCCCCCCHHHHHCCCEECCEE
ARAPGPKDILVAGPRGIVVARNFARNFGEPELWSTYAPSPLDLVTLQGRDLNGDGFDDVV
ECCCCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH
IRNLALGQFLALTTHNGGMGGVAFNPPDPWMTFAGQTNLTAWNNPSHGETIRLVRFGKKL
HHHHHHCEEEEEEECCCCCCCEECCCCCCCEEECCCCCCEECCCCCCCCEEEEEECCCEE
MLTAGSATGLVYSAIDAGKFSPGWRHLCNTCYTTLTDWRPERQAAAIAWADLDGSGSEWV
EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE
VFTRDTGLEIAPGVAP
EEEECCCCEECCCCCC
>Mature Secondary Structure
MKTLLFLFLVCSATAQFRTDNQQYTGVDLPPRHLVITLDDGVSGTISSTGFNQTQKLGEL
CHHHHHHHHHHHCHHHCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
LANMGILATFFQVGCHFETPSVNGSDPLSSACMNGDVHPLSIDRELLGRGHIIANHTWFH
HHCCHHHHHHHHHCCEECCCCCCCCCCHHHHHCCCCCCEEECCHHHHCCCCEEECCEEEE
VPLTYIKSDPARVLRHVRLAQQMLDQFQPDGIRLFRPPGLAFDPTVAAILNADPAIGKLV
EEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHEEECCCCHHHHHH
GPIGMDVDATAPVGGLQFNGDAGWFAAGMSPEDCADAYFEQIQQQCASQGCIVLIHDRTE
CCCCCCCCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCE
VEITTDWALRVTRRLFERLGPAFTAVPTDATPGILGNTRVGAVTLLTREFGSSDGIGPTV
EEEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
MGNITGTRKAAACKVRGDMQIWCALPSASGGAVPTLDPASPWLAIADPEWVASGSKFWLA
EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEE
DIDGDGSDDVVYGTSRGIWAALSNERAGFGEPKLVSAYFSTANGWDAATIRNGLRFGNFY
EECCCCCCCEEEECCCCEEEEECCCCCCCCCCCEEEEEHHCCCCCCHHHHHCCCEECCEE
ARAPGPKDILVAGPRGIVVARNFARNFGEPELWSTYAPSPLDLVTLQGRDLNGDGFDDVV
ECCCCCCCEEEECCCCEEEEEHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH
IRNLALGQFLALTTHNGGMGGVAFNPPDPWMTFAGQTNLTAWNNPSHGETIRLVRFGKKL
HHHHHHCEEEEEEECCCCCCCEECCCCCCCEEECCCCCCEECCCCCCCCEEEEEECCCEE
MLTAGSATGLVYSAIDAGKFSPGWRHLCNTCYTTLTDWRPERQAAAIAWADLDGSGSEWV
EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEE
VFTRDTGLEIAPGVAP
EEEECCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA