| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is cya3 [H]
Identifier: 116626875
GI number: 116626875
Start: 9849491
End: 9851512
Strand: Direct
Name: cya3 [H]
Synonym: Acid_7851
Alternate gene names: 116626875
Gene position: 9849491-9851512 (Clockwise)
Preceding gene: 116626873
Following gene: 116626880
Centisome position: 98.83
GC content: 63.4
Gene sequence:
>2022_bases ATGGCTCACGTGTTGTTCACGGACCTGGTGGGCTATTCGCTGCTGCCGATGGACCGCCAGAAGGAGTACCTCGGCGAGTT GCAGCGGATTGTGCAGGGATCGCCCCGTTTTCAAGCGGCGGAAGCGGCCGGTGAAATCATCAGCCTGCCGACAGGGGACG GCATGGCCCTGGCGTTCTTTGGGGATCCCACGGCGGCGGCGCAGTGCGCGCTGGAAGTGGCCGCCAGCCTGAAGAGCAGG CCGCATCTGCAGCTCCGGATGGGCATTCATAGCGGTCCTGTGTATCGCGTAGCCGATGTAAACGCCAATGCCAACGTGGC CGGCGGCGGAATCAACATGGCGCAGCGCGTGATGGATTGCGGAGATGCGGGGCACATCCTGGTATCGAAAACCATGGCTG ACGTGCTGCTGCAGTTCAGCCAGTGGGCACCGTATCTCGCCGATCTCGGCGAATGCACGGTGAAGCACGGCGTCACGGTG CGCATCTTCTGTTTGGCGACAGCCGAGGTGGGGAACGTCGAGCGGCCGCGCAAGCTTCGCGCCGCCGAGCCAACTGCGAA ACCCCGACTACTGCTGGCCGGAGCCTTGGCGCTGGCGGCGGTAGCCGTCACGGCCGGCGCCCTCTGGCTTGGACGCGGCG GCGCAGGGTCCCGATCCGGAGACCGGGCCTCGATTGTGGTGCTGCCCTTTGTGGACAACAGTCCCGGAAAGAATCAGGAG TATTTCTCGGACGGCCTGACGGAGGAATTGCTGAACGCACTGGCGAGGATTCCCGGGCTGCGGGTCACAGGCCGAACGTC AAGTTTTCAATTCAAAGGGAAGACGGAGGACTACGGCGAGATCGGCAGGAAGCTGAGCGTCGCGAACATTCTGGAAGGAA GCGTGGGGCAGCAGGGGAACCGGACCAAGGTAACGGCGCGCCTGATCCAGGCATCGGACGGATTTCAGATCTGGTCGGCG ACCTTCGACCGGGAGGTGGACAATATCTTCGCTGTGCAGGAGCAGATCGCGAGTGCCGTAGCGGGTGCGCTGAAGGTGAG ACTGCTGGCAGGGAAGAACACCGGACCGGCCGCCAGGAGCACGAACGCCGAAGCCTACAAGGCGTACCTGATGGGACGCT ATTTTCGGAGGCAGCGGGACAAGCAGAATCTGGAGAAGGCTGCGGCCTACTTTGATGATGCCATCCGGCTCGACCCGGGT TATGCACCCGCATGGGCCGAGCTTTCGTTTACGCGCACGAGCCAGGAGACTCTTCGCTACGTGCCCGCGGAAGAGGGGAA TCGTAAGGCGGAGGAAGCTGTCCAGCGGGCGCTGGCGCTGGACCCGAACCTTGCGCAGGCACACGTAGCGCTGGGTTCGA TCCAAATGACACGCCGCTGGGACTGGGCAGGCGCCAATGCTTCGTTTCAAAGGGCGCGGGAGTTGGAGCCCGGCAACGCC GAGGCGATCCGCGGAGCAGCGTCGCTGGCCAACAATCTGGGACATCTGGACGAGGCGGTCGCGCTCGGCAGGAGGGCGAT CGAAATCGACCCGCTGGATTCCGTTACGTACAACAATCTTGGGATCGTGCTGTACCGCGCGGGACGTCCGGAGGAGGCAG TGGCTGAGTTCAGGAGGGCGCTGGAAATCACGCCGGAACGCGAGAGGACCCATTCCATGATCGGCCGCGTCTACCTGGTG CAATCCCGGCCGCAGGAGGCGTTGGCGGAGATGCTGCTCGAGAAGCGGCCCGCCTTCCGGCTGTTCGGATTGGGGCTAGC GTACCATGCGCTCGGTCGGAAGCAGGAATCAGACGCGAGCCTGGCGGAGCTGATCCAGAAGTTCCCAACGGGATACCCGT ATCAAATCGCAGAGCTGTATGCGTTTCGCGGGGAGAATGAGAAAGCGTTCGAATGGCTGGAGCGAGCCTATGCCGAGCCG GACCCGGGTCTGCGCGAAATGAAAGCGGAGCCGTTGCTGAACAGCCTGCGAAGGGACCCGCGCTACACAGCGCTGCTGAA GAAGATCGGGCTGGCAATGTGA
Upstream 100 bases:
>100_bases GAACCGCCAGGGTTCGGTCAGCGAATTCAGCGAAGAGCTTTGCCGCGCATTGAGGGGCGCCAAGACGGTCCGCAGGGATA CCGGCACGGGCACCGTGGAG
Downstream 100 bases:
>100_bases ATGACGCTATCTTCCGCTGACTTGCCGGACGGCGGCGGCGTGATTCCACGCGTCGGGCTTAATCTTCATTCCGAAGCCGG GATCCTCGGAAACCTGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MAHVLFTDLVGYSLLPMDRQKEYLGELQRIVQGSPRFQAAEAAGEIISLPTGDGMALAFFGDPTAAAQCALEVAASLKSR PHLQLRMGIHSGPVYRVADVNANANVAGGGINMAQRVMDCGDAGHILVSKTMADVLLQFSQWAPYLADLGECTVKHGVTV RIFCLATAEVGNVERPRKLRAAEPTAKPRLLLAGALALAAVAVTAGALWLGRGGAGSRSGDRASIVVLPFVDNSPGKNQE YFSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVANILEGSVGQQGNRTKVTARLIQASDGFQIWSA TFDREVDNIFAVQEQIASAVAGALKVRLLAGKNTGPAARSTNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFDDAIRLDPG YAPAWAELSFTRTSQETLRYVPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRARELEPGNA EAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNLGIVLYRAGRPEEAVAEFRRALEITPERERTHSMIGRVYLV QSRPQEALAEMLLEKRPAFRLFGLGLAYHALGRKQESDASLAELIQKFPTGYPYQIAELYAFRGENEKAFEWLERAYAEP DPGLREMKAEPLLNSLRRDPRYTALLKKIGLAM
Sequences:
>Translated_673_residues MAHVLFTDLVGYSLLPMDRQKEYLGELQRIVQGSPRFQAAEAAGEIISLPTGDGMALAFFGDPTAAAQCALEVAASLKSR PHLQLRMGIHSGPVYRVADVNANANVAGGGINMAQRVMDCGDAGHILVSKTMADVLLQFSQWAPYLADLGECTVKHGVTV RIFCLATAEVGNVERPRKLRAAEPTAKPRLLLAGALALAAVAVTAGALWLGRGGAGSRSGDRASIVVLPFVDNSPGKNQE YFSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVANILEGSVGQQGNRTKVTARLIQASDGFQIWSA TFDREVDNIFAVQEQIASAVAGALKVRLLAGKNTGPAARSTNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFDDAIRLDPG YAPAWAELSFTRTSQETLRYVPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRARELEPGNA EAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNLGIVLYRAGRPEEAVAEFRRALEITPERERTHSMIGRVYLV QSRPQEALAEMLLEKRPAFRLFGLGLAYHALGRKQESDASLAELIQKFPTGYPYQIAELYAFRGENEKAFEWLERAYAEP DPGLREMKAEPLLNSLRRDPRYTALLKKIGLAM >Mature_672_residues AHVLFTDLVGYSLLPMDRQKEYLGELQRIVQGSPRFQAAEAAGEIISLPTGDGMALAFFGDPTAAAQCALEVAASLKSRP HLQLRMGIHSGPVYRVADVNANANVAGGGINMAQRVMDCGDAGHILVSKTMADVLLQFSQWAPYLADLGECTVKHGVTVR IFCLATAEVGNVERPRKLRAAEPTAKPRLLLAGALALAAVAVTAGALWLGRGGAGSRSGDRASIVVLPFVDNSPGKNQEY FSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVANILEGSVGQQGNRTKVTARLIQASDGFQIWSAT FDREVDNIFAVQEQIASAVAGALKVRLLAGKNTGPAARSTNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFDDAIRLDPGY APAWAELSFTRTSQETLRYVPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRARELEPGNAE AIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNLGIVLYRAGRPEEAVAEFRRALEITPERERTHSMIGRVYLVQ SRPQEALAEMLLEKRPAFRLFGLGLAYHALGRKQESDASLAELIQKFPTGYPYQIAELYAFRGENEKAFEWLERAYAEPD PGLREMKAEPLLNSLRRDPRYTALLKKIGLAM
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI32307150, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319387, Length=201, Percent_Identity=24.3781094527363, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 73455; Mature: 73323
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVLFTDLVGYSLLPMDRQKEYLGELQRIVQGSPRFQAAEAAGEIISLPTGDGMALAFF CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCEEEEEE GDPTAAAQCALEVAASLKSRPHLQLRMGIHSGPVYRVADVNANANVAGGGINMAQRVMDC CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHC GDAGHILVSKTMADVLLQFSQWAPYLADLGECTVKHGVTVRIFCLATAEVGNVERPRKLR CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHC AAEPTAKPRLLLAGALALAAVAVTAGALWLGRGGAGSRSGDRASIVVLPFVDNSPGKNQE CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEECCCCCCCHH YFSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVANILEGSVGQQGN HHHCCHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC RTKVTARLIQASDGFQIWSATFDREVDNIFAVQEQIASAVAGALKVRLLAGKNTGPAARS CHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC TNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFDDAIRLDPGYAPAWAELSFTRTSQETLRY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCHHHHHC VPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRARELEPGNA CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHCCCCCCH EAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNLGIVLYRAGRPEEAVAEFRRA HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCEEEEEECCCCHHHHHHHHHH LEITPERERTHSMIGRVYLVQSRPQEALAEMLLEKRPAFRLFGLGLAYHALGRKQESDAS HCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH LAELIQKFPTGYPYQIAELYAFRGENEKAFEWLERAYAEPDPGLREMKAEPLLNSLRRDP HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC RYTALLKKIGLAM HHHHHHHHHCCCC >Mature Secondary Structure AHVLFTDLVGYSLLPMDRQKEYLGELQRIVQGSPRFQAAEAAGEIISLPTGDGMALAFF CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCCCCEEEEEE GDPTAAAQCALEVAASLKSRPHLQLRMGIHSGPVYRVADVNANANVAGGGINMAQRVMDC CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHC GDAGHILVSKTMADVLLQFSQWAPYLADLGECTVKHGVTVRIFCLATAEVGNVERPRKLR CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHC AAEPTAKPRLLLAGALALAAVAVTAGALWLGRGGAGSRSGDRASIVVLPFVDNSPGKNQE CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEECCCCCCCHH YFSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVANILEGSVGQQGN HHHCCHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC RTKVTARLIQASDGFQIWSATFDREVDNIFAVQEQIASAVAGALKVRLLAGKNTGPAARS CHHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCC TNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFDDAIRLDPGYAPAWAELSFTRTSQETLRY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEECCCHHHHHC VPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGANASFQRARELEPGNA CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHCCCCCCH EAIRGAASLANNLGHLDEAVALGRRAIEIDPLDSVTYNNLGIVLYRAGRPEEAVAEFRRA HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCEEEEEECCCCHHHHHHHHHH LEITPERERTHSMIGRVYLVQSRPQEALAEMLLEKRPAFRLFGLGLAYHALGRKQESDAS HCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH LAELIQKFPTGYPYQIAELYAFRGENEKAFEWLERAYAEPDPGLREMKAEPLLNSLRRDP HHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC RYTALLKKIGLAM HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]