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The map label for this gene is ybeX [C]

Identifier: 116626741

GI number: 116626741

Start: 9687753

End: 9689015

Strand: Direct

Name: ybeX [C]

Synonym: Acid_7713

Alternate gene names: 116626741

Gene position: 9687753-9689015 (Clockwise)

Preceding gene: 116626740

Following gene: 116626742

Centisome position: 97.21

GC content: 60.65

Gene sequence:

>1263_bases
ATGATTCTCGGCATCCTCCTGGGTATCCTGATCACCATTCCGCTGCTCGCCCTCACCACCTTCGTCCAGGTGCTCTACCT
GGAGAGTCTGCGCTTGCGCACGCGCGATCTGCCCTCGCTCAAATTCTTCAAGGACACGCTAGAGGATAAATTGGCGTTGA
AGACCGAGGACGGCGCCGGCGCATTCTCGCTGGTCAAGCACACTCTGCTCGCCCTGCTCGGCATCTTTTACTTCGCATGG
TTCTCCGACGGCACACCCTGGCATGCCGTCATCTTCTGGCAGGCCATTCTGGCCGTGATCGTCACCATGATCATGGTCTG
CTTCGCGCTGCCCCAACTACTCTACCGCCGGACCTCCGGCCACTGGCTCCTGCCCCTGGTGCCGCTGCTCCGCCTGATCG
GCCTGATCACGCGTCCCTTCGTGGTGATGCTCGCATTCTTCCAGTCGCTGGTCGATCTCACCGACGATACAGTCGATGCC
AACGAAGAGCCCACTCCGGCCGAAAACATCGAAGCGCTCATCTCCGCCGGCACGGAAGAAGGTCTGATCGAAGAGGAAGA
CCGCAAGTTGATTCAATCCGTGGTCGAGTTCGGCGACAAGGTGGTACGCGAGGTCATGACGCCGCGCCCCAACATCGTGG
CCATCGCCGCCGACGCCACGCTCGAACAACTTCGCCAGCTCGTCATCACCGAGCAGTACTCCCGCATCCCGGTCTACGAA
GGCACCATCGATAACGTGATCGGATTCGTTCACGTACGCGACATGTTCGAGCTGCAGGAAGAGGAGCGCGAGAAGCGCAC
CGTCCGCGGCCTCGTCCGCAACATCATGCTCGTGCCCGAGACCAAGCCGGTCAGCGTGCTCATGCGGCGCATGCAGCAGG
AAAATACCCACATGGTCATTGTGGTGGACGAGTACGGCAACACCGCCGGTCTCGCCACCATGGAAGACCTGCTCGAAGTC
ATCATCGGCGAAATCCGCGACGAGCACGAACCCGATAGCGATGTCGCCGAAGATGGCCGCGGCGGCTTCATCGTCTCCGG
CAGCTTCGATCTCGATCGCATTACCGATCTCATCGATACCTTCCATCGCGGTGATGACATCGAATCCACCACGGTGGGCG
GACTGGTCAGCGAATGGCTCGGCCGCGTGCCCAAAACCGGCGAGTTCGTCGAACGCGACGGCGTCCGCCTCGAAGTGCTG
GCCAGCGACGAATTGCGCGTCGGCCAGGTCCGAATCAGTAAATCACAAACGGTTGCTCAATGA

Upstream 100 bases:

>100_bases
GGCACGATCATGAAGTCGATCGCGGCCGCATGGCCAGCCTCGAAAAACGCTGGCGCGCCAAACTCGGTCTTCCCACTGGC
CTCATCGAGCGGGTGCAGTC

Downstream 100 bases:

>100_bases
ATATAGAATTCAGGTCCGGTTTCGTCTCCCTGATTGGCCGGCCTAACGCCGGCAAATCCACGCTCCTCAACGCCCTGGTC
GGCCAGAAAGTGGCGATCGT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MILGILLGILITIPLLALTTFVQVLYLESLRLRTRDLPSLKFFKDTLEDKLALKTEDGAGAFSLVKHTLLALLGIFYFAW
FSDGTPWHAVIFWQAILAVIVTMIMVCFALPQLLYRRTSGHWLLPLVPLLRLIGLITRPFVVMLAFFQSLVDLTDDTVDA
NEEPTPAENIEALISAGTEEGLIEEEDRKLIQSVVEFGDKVVREVMTPRPNIVAIAADATLEQLRQLVITEQYSRIPVYE
GTIDNVIGFVHVRDMFELQEEEREKRTVRGLVRNIMLVPETKPVSVLMRRMQQENTHMVIVVDEYGNTAGLATMEDLLEV
IIGEIRDEHEPDSDVAEDGRGGFIVSGSFDLDRITDLIDTFHRGDDIESTTVGGLVSEWLGRVPKTGEFVERDGVRLEVL
ASDELRVGQVRISKSQTVAQ

Sequences:

>Translated_420_residues
MILGILLGILITIPLLALTTFVQVLYLESLRLRTRDLPSLKFFKDTLEDKLALKTEDGAGAFSLVKHTLLALLGIFYFAW
FSDGTPWHAVIFWQAILAVIVTMIMVCFALPQLLYRRTSGHWLLPLVPLLRLIGLITRPFVVMLAFFQSLVDLTDDTVDA
NEEPTPAENIEALISAGTEEGLIEEEDRKLIQSVVEFGDKVVREVMTPRPNIVAIAADATLEQLRQLVITEQYSRIPVYE
GTIDNVIGFVHVRDMFELQEEEREKRTVRGLVRNIMLVPETKPVSVLMRRMQQENTHMVIVVDEYGNTAGLATMEDLLEV
IIGEIRDEHEPDSDVAEDGRGGFIVSGSFDLDRITDLIDTFHRGDDIESTTVGGLVSEWLGRVPKTGEFVERDGVRLEVL
ASDELRVGQVRISKSQTVAQ
>Mature_420_residues
MILGILLGILITIPLLALTTFVQVLYLESLRLRTRDLPSLKFFKDTLEDKLALKTEDGAGAFSLVKHTLLALLGIFYFAW
FSDGTPWHAVIFWQAILAVIVTMIMVCFALPQLLYRRTSGHWLLPLVPLLRLIGLITRPFVVMLAFFQSLVDLTDDTVDA
NEEPTPAENIEALISAGTEEGLIEEEDRKLIQSVVEFGDKVVREVMTPRPNIVAIAADATLEQLRQLVITEQYSRIPVYE
GTIDNVIGFVHVRDMFELQEEEREKRTVRGLVRNIMLVPETKPVSVLMRRMQQENTHMVIVVDEYGNTAGLATMEDLLEV
IIGEIRDEHEPDSDVAEDGRGGFIVSGSFDLDRITDLIDTFHRGDDIESTTVGGLVSEWLGRVPKTGEFVERDGVRLEVL
ASDELRVGQVRISKSQTVAQ

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=256, Percent_Identity=28.125, Blast_Score=114, Evalue=2e-25,
Organism=Escherichia coli, GI1786879, Length=254, Percent_Identity=31.1023622047244, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI87082033, Length=250, Percent_Identity=29.2, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1788119, Length=237, Percent_Identity=30.379746835443, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1790664, Length=256, Percent_Identity=25, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI145693175, Length=335, Percent_Identity=25.3731343283582, Blast_Score=92, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47172; Mature: 47172

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGILLGILITIPLLALTTFVQVLYLESLRLRTRDLPSLKFFKDTLEDKLALKTEDGAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCC
AFSLVKHTLLALLGIFYFAWFSDGTPWHAVIFWQAILAVIVTMIMVCFALPQLLYRRTSG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HWLLPLVPLLRLIGLITRPFVVMLAFFQSLVDLTDDTVDANEEPTPAENIEALISAGTEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
GLIEEEDRKLIQSVVEFGDKVVREVMTPRPNIVAIAADATLEQLRQLVITEQYSRIPVYE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCC
GTIDNVIGFVHVRDMFELQEEEREKRTVRGLVRNIMLVPETKPVSVLMRRMQQENTHMVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEEE
VVDEYGNTAGLATMEDLLEVIIGEIRDEHEPDSDVAEDGRGGFIVSGSFDLDRITDLIDT
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHH
FHRGDDIESTTVGGLVSEWLGRVPKTGEFVERDGVRLEVLASDELRVGQVRISKSQTVAQ
HHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCEEECCEEECCCHHCCC
>Mature Secondary Structure
MILGILLGILITIPLLALTTFVQVLYLESLRLRTRDLPSLKFFKDTLEDKLALKTEDGAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCC
AFSLVKHTLLALLGIFYFAWFSDGTPWHAVIFWQAILAVIVTMIMVCFALPQLLYRRTSG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HWLLPLVPLLRLIGLITRPFVVMLAFFQSLVDLTDDTVDANEEPTPAENIEALISAGTEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
GLIEEEDRKLIQSVVEFGDKVVREVMTPRPNIVAIAADATLEQLRQLVITEQYSRIPVYE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCC
GTIDNVIGFVHVRDMFELQEEEREKRTVRGLVRNIMLVPETKPVSVLMRRMQQENTHMVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEEE
VVDEYGNTAGLATMEDLLEVIIGEIRDEHEPDSDVAEDGRGGFIVSGSFDLDRITDLIDT
EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEECCCCHHHHHHHHHH
FHRGDDIESTTVGGLVSEWLGRVPKTGEFVERDGVRLEVLASDELRVGQVRISKSQTVAQ
HHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEECCCEEECCEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]