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The map label for this gene is 116626638

Identifier: 116626638

GI number: 116626638

Start: 9536908

End: 9537876

Strand: Direct

Name: 116626638

Synonym: Acid_7603

Alternate gene names: NA

Gene position: 9536908-9537876 (Clockwise)

Preceding gene: 116626636

Following gene: 116626639

Centisome position: 95.7

GC content: 61.2

Gene sequence:

>969_bases
TTGTACGATTCAACTGCACTCCGCCGCGGAGGGCTGGAACCAGCCGGAACCATTCTCCGCTCAACCCATCCGCACCTCGT
AGTATCGAAGCAGAAGCTTCGCCGCGCCGAGGTGATCGAACTCGTTCGGGAAAAGCGGGAGACCGCCAACCAGACCCTCG
GATTCGCCTCACGGCCCTTCGTCCTCTGCGGCCTGCCGGTGAAGCGCCCGCGACCGGGGATCCTGTTGCATGAAAGGCGC
AACGGCCGATTCCTCTTGCAGGTGACCGGGCATCCCAGCTACGGACTGCCATGGGGGCAGGATCGTCTAGTTCCTCTTTA
CCTCGCGACGCTGGCGGTTCGGCAGCAGAGCGAGACGATCACCTTCGACAGCGGTGCCGAGATGCTGGACACGTTCGGCA
TGCTGCAGGGCGGGTCTCAGTACCGCCGCCTGGTCGGGGCCTTTCAGAGAGTGTTCGGTGCCACCATCTTCTTCGGCGCC
AATACCCAAGTGAAGGCCCCCGTCTTTCATCAGGTCCGCTTCAACTTCATGAGCGAAGCGCGCATCTGGTACGGGCGCAA
TCCCGACCAGCCCAATCTGCGGGGTGATTGCCGGAACATGATCGTGTTGACGCGTGAGTTCTACCAGGAGGTCACGTCCC
ATCCGATACCCACTGACCTGCAAGCTGCCAAGGCTCTGTCGTGTGCACCCGCCGCCTTAGACCTCTTTACCTGGCTCTCG
TATCGCTGCTTCATCGCCAAGGGCGAAGAACGCATTCCGCTTTTTGGGGAATTTGGTCTGGTCGGCCAATTAGGTAGTGG
GGAATATCGACGGCCCCGGAAATTCCGGGAATGTTTGGAGAACTGGCTAGACTTGGTGAAGGCCCTGTGGCCCTCGTGTC
CGGCGCGGATCAGCGGTGACGGGATGCGGCTAATCGTGACGCCCGCCGCTGCGATCGGTCTACCTGGAGGTCACCATGAT
TGCGCATGA

Upstream 100 bases:

>100_bases
TAACGAAAACGTGCCGTCATTTCGATGGCGTTCCCTTACTCCGATTCTCTCTCGGGCAGCTCCAAATTGCGCTGCAAACT
GAGCGCTGGAGCGAACCGAT

Downstream 100 bases:

>100_bases
TGGAGCGCCTGTTGGTTGGCGTCAGCGCATCCCGCTGGCCACAATAGACAAGGTGGTTGCGGCGCGACTCGGCCACACGC
GCGTCAGCGGTAGCGCACAT

Product: plasmid encoded RepA protein

Products: NA

Alternate protein names: RepA Replicase Protein

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MYDSTALRRGGLEPAGTILRSTHPHLVVSKQKLRRAEVIELVREKRETANQTLGFASRPFVLCGLPVKRPRPGILLHERR
NGRFLLQVTGHPSYGLPWGQDRLVPLYLATLAVRQQSETITFDSGAEMLDTFGMLQGGSQYRRLVGAFQRVFGATIFFGA
NTQVKAPVFHQVRFNFMSEARIWYGRNPDQPNLRGDCRNMIVLTREFYQEVTSHPIPTDLQAAKALSCAPAALDLFTWLS
YRCFIAKGEERIPLFGEFGLVGQLGSGEYRRPRKFRECLENWLDLVKALWPSCPARISGDGMRLIVTPAAAIGLPGGHHD
CA

Sequences:

>Translated_322_residues
MYDSTALRRGGLEPAGTILRSTHPHLVVSKQKLRRAEVIELVREKRETANQTLGFASRPFVLCGLPVKRPRPGILLHERR
NGRFLLQVTGHPSYGLPWGQDRLVPLYLATLAVRQQSETITFDSGAEMLDTFGMLQGGSQYRRLVGAFQRVFGATIFFGA
NTQVKAPVFHQVRFNFMSEARIWYGRNPDQPNLRGDCRNMIVLTREFYQEVTSHPIPTDLQAAKALSCAPAALDLFTWLS
YRCFIAKGEERIPLFGEFGLVGQLGSGEYRRPRKFRECLENWLDLVKALWPSCPARISGDGMRLIVTPAAAIGLPGGHHD
CA
>Mature_322_residues
MYDSTALRRGGLEPAGTILRSTHPHLVVSKQKLRRAEVIELVREKRETANQTLGFASRPFVLCGLPVKRPRPGILLHERR
NGRFLLQVTGHPSYGLPWGQDRLVPLYLATLAVRQQSETITFDSGAEMLDTFGMLQGGSQYRRLVGAFQRVFGATIFFGA
NTQVKAPVFHQVRFNFMSEARIWYGRNPDQPNLRGDCRNMIVLTREFYQEVTSHPIPTDLQAAKALSCAPAALDLFTWLS
YRCFIAKGEERIPLFGEFGLVGQLGSGEYRRPRKFRECLENWLDLVKALWPSCPARISGDGMRLIVTPAAAIGLPGGHHD
CA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36123; Mature: 36123

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDSTALRRGGLEPAGTILRSTHPHLVVSKQKLRRAEVIELVREKRETANQTLGFASRPF
CCCCHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VLCGLPVKRPRPGILLHERRNGRFLLQVTGHPSYGLPWGQDRLVPLYLATLAVRQQSETI
EEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
TFDSGAEMLDTFGMLQGGSQYRRLVGAFQRVFGATIFFGANTQVKAPVFHQVRFNFMSEA
EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCC
RIWYGRNPDQPNLRGDCRNMIVLTREFYQEVTSHPIPTDLQAAKALSCAPAALDLFTWLS
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
YRCFIAKGEERIPLFGEFGLVGQLGSGEYRRPRKFRECLENWLDLVKALWPSCPARISGD
HEEEEECCCCCCCEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCC
GMRLIVTPAAAIGLPGGHHDCA
CEEEEEECHHHHCCCCCCCCCC
>Mature Secondary Structure
MYDSTALRRGGLEPAGTILRSTHPHLVVSKQKLRRAEVIELVREKRETANQTLGFASRPF
CCCCHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
VLCGLPVKRPRPGILLHERRNGRFLLQVTGHPSYGLPWGQDRLVPLYLATLAVRQQSETI
EEECCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
TFDSGAEMLDTFGMLQGGSQYRRLVGAFQRVFGATIFFGANTQVKAPVFHQVRFNFMSEA
EECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCC
RIWYGRNPDQPNLRGDCRNMIVLTREFYQEVTSHPIPTDLQAAKALSCAPAALDLFTWLS
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHH
YRCFIAKGEERIPLFGEFGLVGQLGSGEYRRPRKFRECLENWLDLVKALWPSCPARISGD
HEEEEECCCCCCCEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCC
GMRLIVTPAAAIGLPGGHHDCA
CEEEEEECHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA