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The map label for this gene is ygiC [C]

Identifier: 116626181

GI number: 116626181

Start: 8961452

End: 8962582

Strand: Direct

Name: ygiC [C]

Synonym: Acid_7141

Alternate gene names: 116626181

Gene position: 8961452-8962582 (Clockwise)

Preceding gene: 116626180

Following gene: 116626185

Centisome position: 89.92

GC content: 60.04

Gene sequence:

>1131_bases
ATGCGCAGAGTAGCAGCAACGCCGCGTGCCGGCTGGCAGCGGAAAGTCGAAGAGGTCGGGCTCACGTGGCACACCGGCGA
GCAGACCTATTGGAACGAAGCCGCATTCTACGAGTTCACTGCCAAGGAAGTGGACGTGCTGGAGGCGGCCACCAACGAGC
TCGAGACGATGACGCTGCAGGCCGCGCAGCATGTGATCGATAACAAACTCTACGCGCGCCTCGAGATTCCGGAAATCGCA
ATCCCGCTGATTGAGAGCAGTTGGGAGGCGGAGCCACCGTCCTTGTACGGCAGGTTCGATTTCGCGTACGATGGCGCCAA
TCCACCGAAATTGCTGGAGTACAATGCGGACACTCCGACCTCTCTGGTGGAGGCGGCGGTAGTGCAGTGGTACTGGCTCC
AGGACTGCTTCCCGAAACGGGATCAGTTCAACTCGCTGCACGAGCGGCTGGTAGCGCTGTGGAAAGAACTGGCGAAGTAT
ATGCCGGGCCGCCGTCTGAGCCTCTGTTCCATGGACGACGCCGAAGACGGAATGACGGTGACGTATCTGCAGGACACCGC
GCAGCAGGCTGGACTCGAGACATCGATCTTCCCGATCGACGAAGTGGGTTGGGACGGAAACACATTCGTGGGCCCCGAGG
ACGAGCGCCTGGGAGCGATCTTCAAGCTATATCCGTGGGAATGGATGATGCGGGAGGAGTTCGGAAAACATGTGGGCCAA
GCCGACACCATCTGGCTCGAACCGCCCTGGAAGATGATCCTTTCGAATAAGGGCATCCTGCCTGTCTTGTGGGAGTTGTT
TCCACGGCACCCTTATCTCCTGGAGTCGAAATTCGACGGTCCGGGGCTGATGATGGCATGGGCGAAAAAGCCGATGCTGG
GGCGGGAAGGCGCCAACATCCTGCTGCACCAGCCGGGGAAAGATGTCGAGACCGGCGGCGAGTACGGCGAGGGCGGCGCA
ATCTTCCAGCAGATGGCGGCGTTGAAGAGCTTCGACGGGAAGTATCCGGTGATCGGCAGCTGGTTGATCGGGCACGAAGA
AGGTAACGTGGCGGCCGGCATGGGAATCCGGGAATCGGACACGCCGATCACCACCAATACCAGCCAGTTCGTGCCTCATC
TGTTTGACTAG

Upstream 100 bases:

>100_bases
GGGAAGTTATGCGCGGCCGGCAGGCGGCGCCACCTCGTCGCCGGGAGTCGAGCGCGGCGGATTCGGATCGACGGGAGCGG
GCCATGGAGCGGGGGAATAA

Downstream 100 bases:

>100_bases
ACCTCTCCCGGGAAGTCGTTTTGACCGAACTTCCCGGTTAAGGGCTCACACCATAAAGTCAAAGAGCGTGGTGCGCGGCA
TCTTTGCTTGCATCGAGAAC

Product: glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRRVAATPRAGWQRKVEEVGLTWHTGEQTYWNEAAFYEFTAKEVDVLEAATNELETMTLQAAQHVIDNKLYARLEIPEIA
IPLIESSWEAEPPSLYGRFDFAYDGANPPKLLEYNADTPTSLVEAAVVQWYWLQDCFPKRDQFNSLHERLVALWKELAKY
MPGRRLSLCSMDDAEDGMTVTYLQDTAQQAGLETSIFPIDEVGWDGNTFVGPEDERLGAIFKLYPWEWMMREEFGKHVGQ
ADTIWLEPPWKMILSNKGILPVLWELFPRHPYLLESKFDGPGLMMAWAKKPMLGREGANILLHQPGKDVETGGEYGEGGA
IFQQMAALKSFDGKYPVIGSWLIGHEEGNVAAGMGIRESDTPITTNTSQFVPHLFD

Sequences:

>Translated_376_residues
MRRVAATPRAGWQRKVEEVGLTWHTGEQTYWNEAAFYEFTAKEVDVLEAATNELETMTLQAAQHVIDNKLYARLEIPEIA
IPLIESSWEAEPPSLYGRFDFAYDGANPPKLLEYNADTPTSLVEAAVVQWYWLQDCFPKRDQFNSLHERLVALWKELAKY
MPGRRLSLCSMDDAEDGMTVTYLQDTAQQAGLETSIFPIDEVGWDGNTFVGPEDERLGAIFKLYPWEWMMREEFGKHVGQ
ADTIWLEPPWKMILSNKGILPVLWELFPRHPYLLESKFDGPGLMMAWAKKPMLGREGANILLHQPGKDVETGGEYGEGGA
IFQQMAALKSFDGKYPVIGSWLIGHEEGNVAAGMGIRESDTPITTNTSQFVPHLFD
>Mature_376_residues
MRRVAATPRAGWQRKVEEVGLTWHTGEQTYWNEAAFYEFTAKEVDVLEAATNELETMTLQAAQHVIDNKLYARLEIPEIA
IPLIESSWEAEPPSLYGRFDFAYDGANPPKLLEYNADTPTSLVEAAVVQWYWLQDCFPKRDQFNSLHERLVALWKELAKY
MPGRRLSLCSMDDAEDGMTVTYLQDTAQQAGLETSIFPIDEVGWDGNTFVGPEDERLGAIFKLYPWEWMMREEFGKHVGQ
ADTIWLEPPWKMILSNKGILPVLWELFPRHPYLLESKFDGPGLMMAWAKKPMLGREGANILLHQPGKDVETGGEYGEGGA
IFQQMAALKSFDGKYPVIGSWLIGHEEGNVAAGMGIRESDTPITTNTSQFVPHLFD

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=389, Percent_Identity=43.1876606683805, Blast_Score=293, Evalue=9e-81,
Organism=Escherichia coli, GI1790629, Length=370, Percent_Identity=41.6216216216216, Blast_Score=268, Evalue=6e-73,
Organism=Escherichia coli, GI1789361, Length=371, Percent_Identity=29.1105121293801, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 42614; Mature: 42614

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVAATPRAGWQRKVEEVGLTWHTGEQTYWNEAAFYEFTAKEVDVLEAATNELETMTLQ
CCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
AAQHVIDNKLYARLEIPEIAIPLIESSWEAEPPSLYGRFDFAYDGANPPKLLEYNADTPT
HHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHH
SLVEAAVVQWYWLQDCFPKRDQFNSLHERLVALWKELAKYMPGRRLSLCSMDDAEDGMTV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE
TYLQDTAQQAGLETSIFPIDEVGWDGNTFVGPEDERLGAIFKLYPWEWMMREEFGKHVGQ
EEEHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHCCC
ADTIWLEPPWKMILSNKGILPVLWELFPRHPYLLESKFDGPGLMMAWAKKPMLGREGANI
CCEEEECCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCEE
LLHQPGKDVETGGEYGEGGAIFQQMAALKSFDGKYPVIGSWLIGHEEGNVAAGMGIRESD
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCC
TPITTNTSQFVPHLFD
CCCCCCHHHCCCCCCC
>Mature Secondary Structure
MRRVAATPRAGWQRKVEEVGLTWHTGEQTYWNEAAFYEFTAKEVDVLEAATNELETMTLQ
CCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
AAQHVIDNKLYARLEIPEIAIPLIESSWEAEPPSLYGRFDFAYDGANPPKLLEYNADTPT
HHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHH
SLVEAAVVQWYWLQDCFPKRDQFNSLHERLVALWKELAKYMPGRRLSLCSMDDAEDGMTV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEE
TYLQDTAQQAGLETSIFPIDEVGWDGNTFVGPEDERLGAIFKLYPWEWMMREEFGKHVGQ
EEEHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCHHHHCEEEEECCHHHHHHHHHHHHCCC
ADTIWLEPPWKMILSNKGILPVLWELFPRHPYLLESKFDGPGLMMAWAKKPMLGREGANI
CCEEEECCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCEE
LLHQPGKDVETGGEYGEGGAIFQQMAALKSFDGKYPVIGSWLIGHEEGNVAAGMGIRESD
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEECCCCCCCC
TPITTNTSQFVPHLFD
CCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]