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The map label for this gene is yjhC [C]

Identifier: 116626110

GI number: 116626110

Start: 8884947

End: 8886200

Strand: Reverse

Name: yjhC [C]

Synonym: Acid_7068

Alternate gene names: 116626110

Gene position: 8886200-8884947 (Counterclockwise)

Preceding gene: 116626111

Following gene: 116626108

Centisome position: 89.17

GC content: 62.2

Gene sequence:

>1254_bases
ATGACCAGCAGACGGACCTTTGTGCAGATGGCGGCGGCGGGACTTTTACGCGGTGCGCCGCCGAGCGATCAGTTGCAGGT
GGGCTTCATCGGACTGGGCGGACAGGGGACGTCGCGGTTGAACGAATTCATGCGGCACCCGGATGTGACGGCGGCCGCGG
TCTGCGATCTGGATTCGACCCACTTGGATCGCGCGGTAGCCGCGGTCGAGAAAGCGCAAGGGCACAAGCCCGAGAAATTC
CACGATTTCCGCAAATTGCTGGAGCGCAAGGACCTCGACGCGGTTATGATCGGGACGCCTGACCACTGGCACGCGCTGCC
TTTCGTGGAGGCCTGCCGCGCGGGCAAGGACGTCTTCGTGGAGAAGCCGCTCAGCTATTCGATCGGCGAAGGCCGCGCCA
TGGTGAACGCGGCGGTCAAGCACAACAGGATCTCGCAAATGGGCAATCACATCCACAACGACCGGCCTACGTACCGGCGC
GTGGTGGAGGTAATTCAATCCGGCGCGCTGGGGATGATCCACCGTGTGGATTGTTCGCTCACCACGTCCAGCCCTGGTCT
TGGCAGACCCGCCGATTGCGCCCCGCCGCCGGAGCTGGATTACGAATTCTGGCTGGGTCCGGCGCCACGACATCCTTACA
ATCCCCTGCGGTCGCATTTCAACTATCGCTACTTCTGGGATTATTCTGGCGGTGCGCTGATCGATTTCTGGTGCCACTAC
ACGGACGTCGCGGTATGGGCGCTCGATCTGAAATCGCCCACGAGCGTCTCTGCCGCGGGCGGCCGATGGGGCGTGGACGA
CGCGGCCGAGACGCCGGATACGCTCGAAGTGGTCTGTGAGTATCCGGGGTTGATTCTCACCTGGACGCTTCACCCCAACG
GACGTCCCGGCTTCGACGCGATGGGCAGCAGCGTGATCTTCGAGGGCTCCGCGGCCACGCTGGTGACCAATTACAATCGC
TACGAAGTCTACGTCAAAGGGAAGAAGGAAGAGCACTTCCAACCGATGGCCCAGACCATTCCCGATTCGCCGGGCCACAT
TCGCGAATTCCTCGACGCAGTCAAATCGCGCAAGCGCACCACCTGCGACGTGGAGTACGGAAACAGGCTGACCAAAGGCG
GGCTGCTCGCCAACATCGCATATCGCACCGGCGAGCGACTCCACTGGGACGACGCCCACGAACATTTCACTGGGCGCACG
CAGGCCAATCGCTACGTGACCCGGCAGTACCGGAAACCGTGGAAACTTACTTGA

Upstream 100 bases:

>100_bases
GCGAATTTGCGGACCATGCTAAACGCAGATTAGATCGCCCGGCCGGCAGGCGTGGTCACGAGCTTGCGCGGTCGGACGCG
TTGGCTTAGTCTGGCATCTG

Downstream 100 bases:

>100_bases
GCACCGGTAGCACGATGGCGCTGCCTCGGTAGATGCGCTGCGTGGCCTTCACGTAATCGCCGGCGTGCGCCTCAAAGATA
TTCGGCACGAACTTCTGCGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTSRRTFVQMAAAGLLRGAPPSDQLQVGFIGLGGQGTSRLNEFMRHPDVTAAAVCDLDSTHLDRAVAAVEKAQGHKPEKF
HDFRKLLERKDLDAVMIGTPDHWHALPFVEACRAGKDVFVEKPLSYSIGEGRAMVNAAVKHNRISQMGNHIHNDRPTYRR
VVEVIQSGALGMIHRVDCSLTTSSPGLGRPADCAPPPELDYEFWLGPAPRHPYNPLRSHFNYRYFWDYSGGALIDFWCHY
TDVAVWALDLKSPTSVSAAGGRWGVDDAAETPDTLEVVCEYPGLILTWTLHPNGRPGFDAMGSSVIFEGSAATLVTNYNR
YEVYVKGKKEEHFQPMAQTIPDSPGHIREFLDAVKSRKRTTCDVEYGNRLTKGGLLANIAYRTGERLHWDDAHEHFTGRT
QANRYVTRQYRKPWKLT

Sequences:

>Translated_417_residues
MTSRRTFVQMAAAGLLRGAPPSDQLQVGFIGLGGQGTSRLNEFMRHPDVTAAAVCDLDSTHLDRAVAAVEKAQGHKPEKF
HDFRKLLERKDLDAVMIGTPDHWHALPFVEACRAGKDVFVEKPLSYSIGEGRAMVNAAVKHNRISQMGNHIHNDRPTYRR
VVEVIQSGALGMIHRVDCSLTTSSPGLGRPADCAPPPELDYEFWLGPAPRHPYNPLRSHFNYRYFWDYSGGALIDFWCHY
TDVAVWALDLKSPTSVSAAGGRWGVDDAAETPDTLEVVCEYPGLILTWTLHPNGRPGFDAMGSSVIFEGSAATLVTNYNR
YEVYVKGKKEEHFQPMAQTIPDSPGHIREFLDAVKSRKRTTCDVEYGNRLTKGGLLANIAYRTGERLHWDDAHEHFTGRT
QANRYVTRQYRKPWKLT
>Mature_416_residues
TSRRTFVQMAAAGLLRGAPPSDQLQVGFIGLGGQGTSRLNEFMRHPDVTAAAVCDLDSTHLDRAVAAVEKAQGHKPEKFH
DFRKLLERKDLDAVMIGTPDHWHALPFVEACRAGKDVFVEKPLSYSIGEGRAMVNAAVKHNRISQMGNHIHNDRPTYRRV
VEVIQSGALGMIHRVDCSLTTSSPGLGRPADCAPPPELDYEFWLGPAPRHPYNPLRSHFNYRYFWDYSGGALIDFWCHYT
DVAVWALDLKSPTSVSAAGGRWGVDDAAETPDTLEVVCEYPGLILTWTLHPNGRPGFDAMGSSVIFEGSAATLVTNYNRY
EVYVKGKKEEHFQPMAQTIPDSPGHIREFLDAVKSRKRTTCDVEYGNRLTKGGLLANIAYRTGERLHWDDAHEHFTGRTQ
ANRYVTRQYRKPWKLT

Specific function: Glycosidase [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311
- InterPro:   IPR019546 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF10518 TAT_signal [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 46704; Mature: 46573

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRTFVQMAAAGLLRGAPPSDQLQVGFIGLGGQGTSRLNEFMRHPDVTAAAVCDLDST
CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHH
HLDRAVAAVEKAQGHKPEKFHDFRKLLERKDLDAVMIGTPDHWHALPFVEACRAGKDVFV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEE
EKPLSYSIGEGRAMVNAAVKHNRISQMGNHIHNDRPTYRRVVEVIQSGALGMIHRVDCSL
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECEEE
TTSSPGLGRPADCAPPPELDYEFWLGPAPRHPYNPLRSHFNYRYFWDYSGGALIDFWCHY
ECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEEECCCCEEEEHHHHH
TDVAVWALDLKSPTSVSAAGGRWGVDDAAETPDTLEVVCEYPGLILTWTLHPNGRPGFDA
HCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHH
MGSSVIFEGSAATLVTNYNRYEVYVKGKKEEHFQPMAQTIPDSPGHIREFLDAVKSRKRT
CCCCEEECCCCEEEEECCCEEEEEEECCCHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCC
TCDVEYGNRLTKGGLLANIAYRTGERLHWDDAHEHFTGRTQANRYVTRQYRKPWKLT
EEEEHHCCEECCCCEEEEEHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSRRTFVQMAAAGLLRGAPPSDQLQVGFIGLGGQGTSRLNEFMRHPDVTAAAVCDLDST
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHH
HLDRAVAAVEKAQGHKPEKFHDFRKLLERKDLDAVMIGTPDHWHALPFVEACRAGKDVFV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCEEE
EKPLSYSIGEGRAMVNAAVKHNRISQMGNHIHNDRPTYRRVVEVIQSGALGMIHRVDCSL
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECEEE
TTSSPGLGRPADCAPPPELDYEFWLGPAPRHPYNPLRSHFNYRYFWDYSGGALIDFWCHY
ECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEEECCCCEEEEHHHHH
TDVAVWALDLKSPTSVSAAGGRWGVDDAAETPDTLEVVCEYPGLILTWTLHPNGRPGFDA
HCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHH
MGSSVIFEGSAATLVTNYNRYEVYVKGKKEEHFQPMAQTIPDSPGHIREFLDAVKSRKRT
CCCCEEECCCCEEEEECCCEEEEEEECCCHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCC
TCDVEYGNRLTKGGLLANIAYRTGERLHWDDAHEHFTGRTQANRYVTRQYRKPWKLT
EEEEHHCCEECCCCEEEEEHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA