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The map label for this gene is yjhC [C]

Identifier: 116626108

GI number: 116626108

Start: 8881782

End: 8883110

Strand: Reverse

Name: yjhC [C]

Synonym: Acid_7066

Alternate gene names: 116626108

Gene position: 8883110-8881782 (Counterclockwise)

Preceding gene: 116626110

Following gene: 116626107

Centisome position: 89.14

GC content: 59.07

Gene sequence:

>1329_bases
ATGATCGGAATATCAGAAACTGGAGGTCCCATGGCGGACGAATTGAATCGGCGTAATTTTCTTAAGGCGGCCGCGATCGC
CGCAGGCCCGGCGGTGATTGGCGCGCGGGGCGCGAACGATAAGGTGAATATCGGCTGGATCGGAGTCGGCACGCGTGGCT
ACGCGGGGCTCGACTGGCTGCACACGGCGGCCGCGAACGACGTGCAGATCTCCGCCATTTGCGACACCTACGACGGCTAT
ATCGCGCGGGCACAGGATCGCCTGCAGACCATTTGGGGCGCCAAGGCCAAGGCGCACAAGGATTATCGCGAGTTGCTCGC
CGATAAATCGATCGACGCCGTCTATATCATGACGCCGGAGCACCTGCACCACGATATGACGATCGCGGCGCTGAAGGCCG
GCAAGCACGTCTACATCGAAAAGCCGCTGGCACACACCATCGAAGAGGGCTTCGACATCATTAAGGCGTGGGAACAGGCG
AAGAAGGTCGTGCAGGTAGGCACGCAGAATCGCAGCTCGTCCCTCTACAAGAAGGCGAAAGAGCTGATCCAGCAGGGTAT
GGTGGGCGATGTTCATTTCGTGCGCGCCTTCTGGTATCGCAATGGACTGCCCAACGAACCTTCGTGGCGCTATGTGATTC
CCGCCGAGGCCAACCCGCAGAATACCGATTGGAATCGCTTCCTGGGCACCGCGCCCAAACGCGCCTGGGATCCGCACCGT
TACTTCCAGTGGCGCCTGTATTGGGATTACTCGGGCGGCATCTCCACCGACCTGCTGGTGCACCAGACCGATATCGTCAA
CTTCATGCTCTCGAAGACCGTGCCGAAAACCTGCATGGCGAGCGGCGGAAATTATCGCTGGACCGATCCCTCCGACGACC
GCGATGTGCCCGATACGCTCTCCGCTGTCTACGATTATTCGGACAAGATGCAGCTCAACTACAGCTGCTATCTCGGCAAT
GAATTCTTCGGCTTCGGCGAAGAGATTTTCGGCAACGAAGGCACTATCCGGGTGATGAACCGTCAGGACCTGTACTTTGA
ACCCGAGTCCTACAATTCGCGCCGCGCCAACGCGCCCAATCGCGCGCCGGAAAATATTAAAGCGCGCGCCGCCATCCACA
TCAACGGACCGCAGGAGTACAAGGAATCCGATGGCGCCATCAATCACTTCCGCAACTTCATCCAGAGCGTGCTGGGTAAG
GAGCAGGTGATCGCGCCGCCGACCGTGGGCCAACAGGCTGCCATCAGCGGCCACATGGCCACGTTGTCCTTCAAGAACCA
GAAAAAGGCCGTCTGGGACGACACCGCGCAAAAAGTCCACTTCGTCTAA

Upstream 100 bases:

>100_bases
TCCTGGGGACTGGCCCGCAGCAGGATTCCGGCCAGCAGGCCGAGGAGGATCGCGCGTTTCATGGGCTTCTCCATTGCTCC
CGATCATACCGCCCGCTGCT

Downstream 100 bases:

>100_bases
GCGCGACGCGCAAATATGGCCGCCGTCGCCACAGCCCCGGCGGGGACGTCTCCCCGCTGGATTGTCAGCCGCAGTGTAGA
CCTGAGCCTCGTAATCGGCA

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIGISETGGPMADELNRRNFLKAAAIAAGPAVIGARGANDKVNIGWIGVGTRGYAGLDWLHTAAANDVQISAICDTYDGY
IARAQDRLQTIWGAKAKAHKDYRELLADKSIDAVYIMTPEHLHHDMTIAALKAGKHVYIEKPLAHTIEEGFDIIKAWEQA
KKVVQVGTQNRSSSLYKKAKELIQQGMVGDVHFVRAFWYRNGLPNEPSWRYVIPAEANPQNTDWNRFLGTAPKRAWDPHR
YFQWRLYWDYSGGISTDLLVHQTDIVNFMLSKTVPKTCMASGGNYRWTDPSDDRDVPDTLSAVYDYSDKMQLNYSCYLGN
EFFGFGEEIFGNEGTIRVMNRQDLYFEPESYNSRRANAPNRAPENIKARAAIHINGPQEYKESDGAINHFRNFIQSVLGK
EQVIAPPTVGQQAAISGHMATLSFKNQKKAVWDDTAQKVHFV

Sequences:

>Translated_442_residues
MIGISETGGPMADELNRRNFLKAAAIAAGPAVIGARGANDKVNIGWIGVGTRGYAGLDWLHTAAANDVQISAICDTYDGY
IARAQDRLQTIWGAKAKAHKDYRELLADKSIDAVYIMTPEHLHHDMTIAALKAGKHVYIEKPLAHTIEEGFDIIKAWEQA
KKVVQVGTQNRSSSLYKKAKELIQQGMVGDVHFVRAFWYRNGLPNEPSWRYVIPAEANPQNTDWNRFLGTAPKRAWDPHR
YFQWRLYWDYSGGISTDLLVHQTDIVNFMLSKTVPKTCMASGGNYRWTDPSDDRDVPDTLSAVYDYSDKMQLNYSCYLGN
EFFGFGEEIFGNEGTIRVMNRQDLYFEPESYNSRRANAPNRAPENIKARAAIHINGPQEYKESDGAINHFRNFIQSVLGK
EQVIAPPTVGQQAAISGHMATLSFKNQKKAVWDDTAQKVHFV
>Mature_442_residues
MIGISETGGPMADELNRRNFLKAAAIAAGPAVIGARGANDKVNIGWIGVGTRGYAGLDWLHTAAANDVQISAICDTYDGY
IARAQDRLQTIWGAKAKAHKDYRELLADKSIDAVYIMTPEHLHHDMTIAALKAGKHVYIEKPLAHTIEEGFDIIKAWEQA
KKVVQVGTQNRSSSLYKKAKELIQQGMVGDVHFVRAFWYRNGLPNEPSWRYVIPAEANPQNTDWNRFLGTAPKRAWDPHR
YFQWRLYWDYSGGISTDLLVHQTDIVNFMLSKTVPKTCMASGGNYRWTDPSDDRDVPDTLSAVYDYSDKMQLNYSCYLGN
EFFGFGEEIFGNEGTIRVMNRQDLYFEPESYNSRRANAPNRAPENIKARAAIHINGPQEYKESDGAINHFRNFIQSVLGK
EQVIAPPTVGQQAAISGHMATLSFKNQKKAVWDDTAQKVHFV

Specific function: Glycosidase [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family. Glycosyl hydrolase 109 subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=250, Percent_Identity=25.6, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 49695; Mature: 49695

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGISETGGPMADELNRRNFLKAAAIAAGPAVIGARGANDKVNIGWIGVGTRGYAGLDWL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCCCCCCHHHH
HTAAANDVQISAICDTYDGYIARAQDRLQTIWGAKAKAHKDYRELLADKSIDAVYIMTPE
HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECHH
HLHHDMTIAALKAGKHVYIEKPLAHTIEEGFDIIKAWEQAKKVVQVGTQNRSSSLYKKAK
HHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ELIQQGMVGDVHFVRAFWYRNGLPNEPSWRYVIPAEANPQNTDWNRFLGTAPKRAWDPHR
HHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCC
YFQWRLYWDYSGGISTDLLVHQTDIVNFMLSKTVPKTCMASGGNYRWTDPSDDRDVPDTL
EEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCCCCHHHH
SAVYDYSDKMQLNYSCYLGNEFFGFGEEIFGNEGTIRVMNRQDLYFEPESYNSRRANAPN
HHHHCCCCCEEEEEEEEECCHHHCCCHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCC
RAPENIKARAAIHINGPQEYKESDGAINHFRNFIQSVLGKEQVIAPPTVGQQAAISGHMA
CCCCCCEEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHCCCEE
TLSFKNQKKAVWDDTAQKVHFV
EEEECCCCCCHHCCCCHHEECC
>Mature Secondary Structure
MIGISETGGPMADELNRRNFLKAAAIAAGPAVIGARGANDKVNIGWIGVGTRGYAGLDWL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEEEECCCCCCCHHHH
HTAAANDVQISAICDTYDGYIARAQDRLQTIWGAKAKAHKDYRELLADKSIDAVYIMTPE
HHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEECHH
HLHHDMTIAALKAGKHVYIEKPLAHTIEEGFDIIKAWEQAKKVVQVGTQNRSSSLYKKAK
HHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ELIQQGMVGDVHFVRAFWYRNGLPNEPSWRYVIPAEANPQNTDWNRFLGTAPKRAWDPHR
HHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCC
YFQWRLYWDYSGGISTDLLVHQTDIVNFMLSKTVPKTCMASGGNYRWTDPSDDRDVPDTL
EEEEEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCCCCHHHH
SAVYDYSDKMQLNYSCYLGNEFFGFGEEIFGNEGTIRVMNRQDLYFEPESYNSRRANAPN
HHHHCCCCCEEEEEEEEECCHHHCCCHHHHCCCCEEEEEECCCEEECCCCCCCCCCCCCC
RAPENIKARAAIHINGPQEYKESDGAINHFRNFIQSVLGKEQVIAPPTVGQQAAISGHMA
CCCCCCEEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCCHHHHCCCEE
TLSFKNQKKAVWDDTAQKVHFV
EEEECCCCCCHHCCCCHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA